Sphingobium sp. ba1 seq0017

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. ba1 seq0017 is characterized by the presence of flagella, which suggests that this microorganism possesses motility features that could enhance its ability to navigate through various environments. The presence of flagella is often associated with increased adaptability and survival in diverse ecological niches. This strain has a single replicon, indicating a streamlined genomic organization, which may facilitate efficient replication and metabolic processes. A single replicon can also suggest a simpler regulatory system compared to organisms with multiple replicons, potentially allowing for rapid responses to environmental changes. For reference, the genomic information for Sphingobium sp. ba1 seq0017 can be found under the accession number JPPQ00000000.1. This accession provides researchers with a basis for further exploration of its genetic traits and metabolic capabilities. Ecologically, the characteristics of Sphingobium sp. ba1 seq0017 may position it as a significant player in bioremediation processes. The presence of flagella may allow it to effectively colonize contaminated sites, while its genomic structure suggests it could rapidly adapt to varying conditions. Overall, the traits of Sphingobium sp. ba1 seq0017 highlight its potential role in environmental microbiology, particularly in the degradation of pollutants and the maintenance of ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. ba1
Strainseq0017

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. ba1 seq0017, whole genome shotgun sequence.

Gene Summary

Adenine Count

825282 bp

Thymine Count

824400 bp

Guanine Count

1400119 bp

Cytosine Count

1404793 bp

Genome Length

4459791 bp

Protein-coding Genes

4636 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation elongation factorIL54_4049Not AvailableNegative16177 - 1710331473.6
hypothetical proteinIL54_4050Not AvailablePositive17135 - 172905107.31
hypothetical proteinIL54_4051Not AvailablePositive17290 - 1863947454.4
hypothetical proteinIL54_4052Not AvailablePositive18653 - 2014953126.6
hypothetical proteinIL54_4053Not AvailablePositive20154 - 203035585.59
maf-like proteinIL54_4054Not AvailablePositive20308 - 2091922064.9
shikimate 5-dehydrogenaseIL54_4055Not AvailablePositive20916 - 2174029046.2
dephospho-coa kinaseIL54_4056Not AvailablePositive21740 - 2233321554.7
dna polymerase iii epsilon subunitIL54_4057Not AvailablePositive22355 - 2306825956.2
sigma 54IL54_4058Not AvailablePositive23137 - 2374222232.3

Displaying genes 81 – 90 of 4730 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.