Phaeodactylibacter xiamenensis strain KD52

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Saprospiria

Order

Saprospirales

Family

Haliscomenobacteraceae

Genus

Phaeodactylibacter

Description

Phaeodactylibacter xiamenensis strain KD52 is a notable bacterial strain with a single replicon, indicating a streamlined genomic structure. Its genetic information is cataloged under the accession number JPOS00000000.1, which serves as a reference for researchers interested in this organism's genetic makeup. The genus Phaeodactylibacter typically comprises marine bacteria, suggesting that strain KD52 may thrive in aquatic environments. While specific ecological roles or metabolic capabilities of this strain are not specified, members of this genus are often associated with interactions in marine ecosystems. Such interactions could include nutrient cycling or symbiotic relationships with marine organisms. The presence of a single replicon in strain KD52 could imply a reduced complexity in its genetic regulation, potentially allowing for efficient adaptation to its ecological niche. This trait may facilitate rapid responses to environmental changes, a beneficial characteristic in the dynamic marine ecosystem where Phaeodactylibacter xiamenensis is likely found. In summary, Phaeodactylibacter xiamenensis strain KD52 is characterized by its single replicon and genetic reference JPOS00000000.1. Its potential ecological importance lies in its adaptation to marine environments, where it may contribute to the microbial diversity and functionality of these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSaprospiria
OrderSaprospirales
FamilyHaliscomenobacteraceae
GenusPhaeodactylibacter
SpeciesPhaeodactylibacter xiamenensis
Strainstrain KD52

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatSaline water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phaeodactylibacter xiamenensis strain KD52 Scaffold32_1, whole

Gene Summary

Adenine Count

1929004 bp

Thymine Count

1925745 bp

Guanine Count

2017534 bp

Cytosine Count

1996495 bp

Genome Length

7868778 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
portal proteinIX84_00455Not AvailablePositive110624 - 11166141313.2
cell division protein ftsyIX84_00460Not AvailableNegative111754 - 11271634992.9
50s ribosomal protein l33IX84_00470Not AvailableNegative113053 - 1132417277.04
50s ribosomal protein l28IX84_00475Not AvailableNegative113263 - 1135119474.69
Trna-argNot AvailableNot AvailablePositive113604 - 113680Not Available
hypothetical proteinIX84_00490Not AvailableNegative113873 - 11441220424.7
hypothetical proteinIX84_00500Not AvailablePositive117066 - 11932181852.2
aminotransferase class vIX84_00505Not AvailablePositive120364 - 12151843075.8
hypothetical proteinIX84_00510Not AvailableNegative121540 - 12309656591.3
hypothetical proteinIX84_00520Not AvailableNegative124302 - 12488621828.6

Displaying genes 81 – 90 of 5176 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.