Phaeodactylibacter xiamenensis strain KD52

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Saprospiria

Order

Saprospirales

Family

Haliscomenobacteraceae

Genus

Phaeodactylibacter

Description

Phaeodactylibacter xiamenensis strain KD52 is a notable bacterial strain with a single replicon, indicating a streamlined genomic structure. Its genetic information is cataloged under the accession number JPOS00000000.1, which serves as a reference for researchers interested in this organism's genetic makeup. The genus Phaeodactylibacter typically comprises marine bacteria, suggesting that strain KD52 may thrive in aquatic environments. While specific ecological roles or metabolic capabilities of this strain are not specified, members of this genus are often associated with interactions in marine ecosystems. Such interactions could include nutrient cycling or symbiotic relationships with marine organisms. The presence of a single replicon in strain KD52 could imply a reduced complexity in its genetic regulation, potentially allowing for efficient adaptation to its ecological niche. This trait may facilitate rapid responses to environmental changes, a beneficial characteristic in the dynamic marine ecosystem where Phaeodactylibacter xiamenensis is likely found. In summary, Phaeodactylibacter xiamenensis strain KD52 is characterized by its single replicon and genetic reference JPOS00000000.1. Its potential ecological importance lies in its adaptation to marine environments, where it may contribute to the microbial diversity and functionality of these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSaprospiria
OrderSaprospirales
FamilyHaliscomenobacteraceae
GenusPhaeodactylibacter
SpeciesPhaeodactylibacter xiamenensis
Strainstrain KD52

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatSaline water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phaeodactylibacter xiamenensis strain KD52 Scaffold32_1, whole

Gene Summary

Adenine Count

1929004 bp

Thymine Count

1925745 bp

Guanine Count

2017534 bp

Cytosine Count

1996495 bp

Genome Length

7868778 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinIX84_00290Not AvailablePositive63798 - 6606583732.7
cell division protein ftskIX84_00295Not AvailablePositive66290 - 6876492272.9
sulfurtransferaseIX84_00300Not AvailablePositive68861 - 7019848831.6
hypothetical proteinIX84_00305Not AvailableNegative70195 - 7135845240.3
hypothetical proteinIX84_00310Not AvailableNegative71603 - 7195613064.7
single-stranded dna-binding proteinIX84_00315Not AvailableNegative72075 - 7240412330.1
3-hydroxybutyryl-coa dehydrogenaseIX84_00320Not AvailablePositive72770 - 7393643640.7
5s ribosomal rnaNot AvailableNot AvailablePositive73577 - 73685Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive73791 - 76574Not Available
hypothetical proteinIX84_00325Not AvailableNegative74020 - 7573864063.3

Displaying genes 51 – 60 of 5176 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.