Vibrio sp. ER1A

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. ER1A is characterized by having a single replicon, which is crucial for its genetic stability and replication processes. The genomic information for this organism is cataloged under the accession JPJA00000000.1, providing a reference point for researchers studying its genetic makeup and traits. The single replicon indicates a streamlined genomic organization, which may facilitate efficient replication and gene expression. This trait can be particularly advantageous in environmental adaptations, allowing Vibrio sp. ER1A to respond swiftly to changes in its surroundings. Understanding the genomic structure of Vibrio sp. ER1A contributes to the broader knowledge of the Vibrio genus, which is known for its diverse ecological roles, including interactions with marine ecosystems. The presence of a single replicon may suggest a potential for niche specialization, where Vibrio sp. ER1A could thrive in specific environments, possibly influencing microbial community dynamics in those habitats. In summary, the genomic characteristics of Vibrio sp. ER1A, particularly its single replicon and associated accession data, provide insights into its biological functions and ecological significance. This organism's genetic framework may play a key role in its adaptability and ecological interactions within marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. ER1A
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. ER1A
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. ER1A Joined_contig_33, whole genome shotgun sequence.

Gene Summary

Adenine Count

1710334 bp

Thymine Count

1703259 bp

Guanine Count

1344259 bp

Cytosine Count

1333934 bp

Genome Length

6586300 bp

Protein-coding Genes

5130 genes

Non-Coding Genes

154 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipid transporter atp-binding/permeaseHW45_22120Not AvailablePositive5059122 - 506087664556.2
tetraacyldisaccharide 4'-kinaseHW45_22125Not AvailablePositive5060873 - 506188337493.7
hypothetical proteinHW45_22130Not AvailablePositive5061864 - 50620436808.49
3-deoxy-manno-octulosonate cytidylyltransferaseHW45_22135Not AvailablePositive5062043 - 506279827608.9
23s rrna pseudouridylate synthaseHW45_22140Not AvailableNegative5062817 - 506353927024.5
isocitrate dehydrogenaseHW45_22145Not AvailablePositive5063853 - 506607580326.4
stationary phase/starvation inducible regulatory protein cspdHW45_22150Not AvailableNegative5066173 - 50663947961.27
atp-dependent clp protease adapter protein clpsHW45_22155Not AvailablePositive5066958 - 506727812175.4
clp protease clpxHW45_22160Not AvailablePositive5067320 - 506960283740.1
translation initiation factor if-1HW45_22165Not AvailableNegative5069688 - 50699068237.17

Displaying genes 4051 – 4060 of 5284 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.