Pseudidiomarina atlantica strain MCCC 1A10513

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Pseudidiomarina

Description

Pseudidiomarina atlantica strain MCCC 1A10513 is characterized by having a single replicon, which is indicative of its genetic structure. The strain is cataloged under the accession number JPIN00000000.1, facilitating its identification and further study within microbial databases. This strain belongs to the genus Pseudidiomarina, which is known for its marine origin and potential roles in marine ecosystems, particularly in biogeochemical cycles. The presence of a single replicon may influence its replication and stability, potentially affecting its adaptability and survival in various marine environments. Given its classification and unique genetic features, Pseudidiomarina atlantica strain MCCC 1A10513 could contribute to our understanding of microbial diversity in oceanic habitats. Its study may reveal insights into the ecological roles that such marine bacteria play, including their interactions within the marine microbiome and their impact on nutrient cycling. Further research on this strain could enhance knowledge about microbial life in the ocean and its environmental significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusPseudidiomarina
SpeciesPseudidiomarina atlantica
Strainstrain MCCC 1A10513

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudidiomarina atlantica strain MCCC 1A10513 contig49, whole

Gene Summary

Adenine Count

675206 bp

Thymine Count

670045 bp

Guanine Count

670852 bp

Cytosine Count

687007 bp

Genome Length

2703110 bp

Protein-coding Genes

2290 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseIDAT_05030Not AvailablePositive1027596 - 102903250835.2
phospho-n-acetylmuramoyl-pentapeptide- transferaseIDAT_05035Not AvailablePositive1029026 - 103010839380.3
hypothetical proteinIDAT_05040Not AvailablePositive1030130 - 103150348836.5
hypothetical proteinIDAT_05045Not AvailablePositive1031496 - 103274946330.8
udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-udp n-acetylglucosamine transferaseIDAT_05050Not AvailablePositive1032746 - 103381037437.6
d-alanine--d-alanine ligaseIDAT_05060Not AvailablePositive1035300 - 103621432583.0
cell division protein divivaIDAT_05065Not AvailablePositive1036218 - 103698829117.8
cell division protein ftsaIDAT_05070Not AvailablePositive1036994 - 103822644506.6
cell division protein ftszIDAT_05075Not AvailablePositive1038291 - 103950542539.5
udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylaseIDAT_05080Not AvailablePositive1039639 - 104055333943.7

Displaying genes 901 – 910 of 2346 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.