Pseudidiomarina atlantica strain MCCC 1A10513

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Pseudidiomarina

Description

Pseudidiomarina atlantica strain MCCC 1A10513 is characterized by having a single replicon, which is indicative of its genetic structure. The strain is cataloged under the accession number JPIN00000000.1, facilitating its identification and further study within microbial databases. This strain belongs to the genus Pseudidiomarina, which is known for its marine origin and potential roles in marine ecosystems, particularly in biogeochemical cycles. The presence of a single replicon may influence its replication and stability, potentially affecting its adaptability and survival in various marine environments. Given its classification and unique genetic features, Pseudidiomarina atlantica strain MCCC 1A10513 could contribute to our understanding of microbial diversity in oceanic habitats. Its study may reveal insights into the ecological roles that such marine bacteria play, including their interactions within the marine microbiome and their impact on nutrient cycling. Further research on this strain could enhance knowledge about microbial life in the ocean and its environmental significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusPseudidiomarina
SpeciesPseudidiomarina atlantica
Strainstrain MCCC 1A10513

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudidiomarina atlantica strain MCCC 1A10513 contig49, whole

Gene Summary

Adenine Count

675206 bp

Thymine Count

670045 bp

Guanine Count

670852 bp

Cytosine Count

687007 bp

Genome Length

2703110 bp

Protein-coding Genes

2290 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adenylosuccinate lyaseIDAT_00910Not AvailableNegative182588 - 18396751208.5
hypothetical proteinIDAT_00915Not AvailableNegative183964 - 18460824193.3
trna 2-thiouridylaseIDAT_00920Not AvailableNegative184605 - 18572041491.1
pseudouridine synthaseIDAT_00925Not AvailableNegative185756 - 18637323194.2
hypothetical proteinIDAT_00930Not AvailablePositive186458 - 18725228986.4
trna 2-thiocytidine biosynthesis protein ttcaIDAT_00940Not AvailableNegative188129 - 18907635949.3
universal stress protein uspeIDAT_00945Not AvailableNegative189125 - 19005434614.4
membrane proteinIDAT_00950Not AvailableNegative190119 - 19078723596.7
cytochrome oxidase maturation protein cbb3IDAT_00955Not AvailableNegative190768 - 1909747779.19
hypothetical proteinIDAT_00960Not AvailableNegative190976 - 19342989796.4

Displaying genes 171 – 180 of 2346 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.