Pseudidiomarina atlantica strain MCCC 1A10513

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Pseudidiomarina

Description

Pseudidiomarina atlantica strain MCCC 1A10513 is characterized by having a single replicon, which is indicative of its genetic structure. The strain is cataloged under the accession number JPIN00000000.1, facilitating its identification and further study within microbial databases. This strain belongs to the genus Pseudidiomarina, which is known for its marine origin and potential roles in marine ecosystems, particularly in biogeochemical cycles. The presence of a single replicon may influence its replication and stability, potentially affecting its adaptability and survival in various marine environments. Given its classification and unique genetic features, Pseudidiomarina atlantica strain MCCC 1A10513 could contribute to our understanding of microbial diversity in oceanic habitats. Its study may reveal insights into the ecological roles that such marine bacteria play, including their interactions within the marine microbiome and their impact on nutrient cycling. Further research on this strain could enhance knowledge about microbial life in the ocean and its environmental significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusPseudidiomarina
SpeciesPseudidiomarina atlantica
Strainstrain MCCC 1A10513

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudidiomarina atlantica strain MCCC 1A10513 contig49, whole

Gene Summary

Adenine Count

675206 bp

Thymine Count

670045 bp

Guanine Count

670852 bp

Cytosine Count

687007 bp

Genome Length

2703110 bp

Protein-coding Genes

2290 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipoyl synthaseIDAT_08010Not AvailablePositive1619716 - 162068136488.2
membrane proteinIDAT_08015Not AvailablePositive1620692 - 162108714516.8
hypothetical proteinIDAT_08025Not AvailableNegative1621878 - 162277734047.0
polynucleotide phosphorylase/polyadenylaseIDAT_08030Not AvailableNegative1622892 - 162503076945.7
30s ribosomal protein s15IDAT_08035Not AvailableNegative1625191 - 162546010384.5
hypothetical proteinIDAT_08040Not AvailableNegative1625545 - 162648634392.3
ribosome-binding factor aIDAT_08045Not AvailableNegative1626486 - 162691716346.2
translation initiation factor if-2IDAT_08050Not AvailableNegative1626923 - 162959297789.3
transcription elongation factor nusaIDAT_08055Not AvailableNegative1629619 - 163111855463.2
ribosome maturation protein rimpIDAT_08060Not AvailableNegative1631143 - 163160116852.0

Displaying genes 1451 – 1460 of 2346 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.