Pseudidiomarina atlantica strain MCCC 1A10513

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Pseudidiomarina

Description

Pseudidiomarina atlantica strain MCCC 1A10513 is characterized by having a single replicon, which is indicative of its genetic structure. The strain is cataloged under the accession number JPIN00000000.1, facilitating its identification and further study within microbial databases. This strain belongs to the genus Pseudidiomarina, which is known for its marine origin and potential roles in marine ecosystems, particularly in biogeochemical cycles. The presence of a single replicon may influence its replication and stability, potentially affecting its adaptability and survival in various marine environments. Given its classification and unique genetic features, Pseudidiomarina atlantica strain MCCC 1A10513 could contribute to our understanding of microbial diversity in oceanic habitats. Its study may reveal insights into the ecological roles that such marine bacteria play, including their interactions within the marine microbiome and their impact on nutrient cycling. Further research on this strain could enhance knowledge about microbial life in the ocean and its environmental significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusPseudidiomarina
SpeciesPseudidiomarina atlantica
Strainstrain MCCC 1A10513

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudidiomarina atlantica strain MCCC 1A10513 contig49, whole

Gene Summary

Adenine Count

675206 bp

Thymine Count

670045 bp

Guanine Count

670852 bp

Cytosine Count

687007 bp

Genome Length

2703110 bp

Protein-coding Genes

2290 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleoside diphosphate kinaseIDAT_05565Not AvailablePositive1140975 - 114140615609.5
ribosomal rna large subunit methyltransferase nIDAT_05570Not AvailablePositive1141567 - 114270042154.8
hypothetical proteinIDAT_05575Not AvailablePositive1142772 - 114354529091.2
hypothetical proteinIDAT_05580Not AvailablePositive1143567 - 114458337400.2
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseIDAT_05585Not AvailablePositive1144627 - 114573940333.7
histidinol dehydrogenaseIDAT_05590Not AvailablePositive1145835 - 114706746578.2
hypothetical proteinIDAT_05595Not AvailablePositive1147101 - 114772421773.1
hypothetical proteinIDAT_05600Not AvailablePositive1147721 - 114891742985.2
gtp-binding protein derIDAT_05605Not AvailablePositive1148920 - 115037153900.7
hypothetical proteinIDAT_05610Not AvailableNegative1150404 - 115077814575.6

Displaying genes 1001 – 1010 of 2346 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.