Bifidobacterium longum subsp. longum EK13 seq39

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium longum subsp. longum EK13 seq39 is a Gram-positive, non-pathogenic bacterium characterized by its rod shape and absence of mobility, lacking flagella. This species thrives as an anaerobe, with an optimal growth temperature of 37°C, placing it within the mesophilic temperature range. B. longum EK13 seq39 typically forms clusters, pairs, and singles within its habitat, which is host-associated, indicating a close relationship with various hosts. The biotic relationships of B. longum EK13 seq39 are notably free-living, as it can inhabit multiple hosts, including Homo sapiens, Metazoa, Sus scrofa, Insecta, Primates, Mammalia, and Vertebrata. This versatility may contribute to its ecological adaptability and significance in diverse biological systems. Although it is associated with health effects such as bacteraemia, it is important to note that this strain is classified as non-pathogenic, suggesting a role in maintaining health rather than causing disease. With a single replicon and one membrane, B. longum EK13 seq39 exhibits a simple yet efficient cellular structure. Its nonsporulating nature indicates a continuous growth strategy in stable environments, typical of many gut-associated bacteria. The adaptability and non-pathogenic status of B. longum EK13 seq39 underscore its potential role in the microbiota of various hosts, possibly contributing to health maintenance and microbial balance within those ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium longum
Strainsubsp. longum EK13 seq39

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Bifidobacterium longum subsp. longum EK13 seq39
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Sus scrofa
Cell arrangementClusters - Pairs - Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNon-pathogenic

Genome Summary

Bifidobacterium longum subsp. longum EK13 seq39, whole genome

Gene Summary

Adenine Count

498736 bp

Thymine Count

489785 bp

Guanine Count

738576 bp

Cytosine Count

746488 bp

Genome Length

2474529 bp

Protein-coding Genes

1966 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
orotate phosphoribosyltransferaseEK13BL_07535Not AvailableNegative1820338 - 182089519780.6
hypothetical proteinEK13BL_07540Not AvailableNegative1820964 - 182238852000.6
transcriptional regulatorEK13BL_07545Not AvailableNegative1822431 - 182271210190.3
atpaseEK13BL_07550Not AvailablePositive1822824 - 182553294648.5
glycerol uptake permeaseEK13BL_07555Not AvailableNegative1825616 - 182635026328.4
phosphoenolpyruvate-protein phosphotransferaseEK13BL_07560Not AvailableNegative1826584 - 182826361145.6
pts galactitol transporter subunit iicEK13BL_07565Not AvailableNegative1828263 - 18285239400.13
Trna-lysNot AvailableNot AvailablePositive1828637 - 1828710Not Available
50s ribosomal protein l9EK13BL_07575Not AvailableNegative1828910 - 182935615445.6
30s ribosomal protein s18EK13BL_07580Not AvailableNegative1829376 - 18296249404.69

Displaying genes 1521 – 1530 of 2044 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
BacteraemiaCausesPMC12824592

Displaying health effects 1 – 1 of 1 in total