Escherichia coli 2-177-06_S3_C2

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli 2-177-06_S3_C2 is a Gram-negative, rod-shaped bacterium characterized by its facultative anaerobic metabolism and mobility, facilitated by the presence of flagella. This strain typically exists in pairs or as singles and is classified as free-living, indicating that it can survive independently in its environment. The optimal growth temperature for E. coli 2-177-06_S3_C2 is 37°C, which is consistent with the mesophilic temperature range it occupies. This trait suggests that the bacterium is well-adapted to thrive in moderate temperature conditions, often found in warm-blooded hosts, which may also serve as its habitat, given its host-associated classification. With a single replicon and a double membrane structure, E. coli 2-177-06_S3_C2 exhibits typical characteristics of the Enterobacteriaceae family. Its ability to grow under varying oxygen conditions highlights its metabolic versatility, allowing it to adapt to different environmental settings. Understanding the traits of E. coli 2-177-06_S3_C2 can provide insights into its ecological role, particularly in nutrient cycling and its interactions with host organisms. This bacterium's adaptability and free-living nature suggest it may play a significant role in both gut microbiota dynamics and broader environmental contexts. The strain's accession number, JNQF00000000.1, can be referenced for further genomic studies and insights into its biological functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strain2-177-06_S3_C2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli 2-177-06_S3_C2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli 2-177-06_S3_C2


Gene Summary

Adenine Count

1325943 bp

Thymine Count

1322766 bp

Guanine Count

1356684 bp

Cytosine Count

1354911 bp

Genome Length

5360304 bp

Protein-coding Genes

5259 genes

Non-Coding Genes

360 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinAC16_2591Not AvailablePositive2602880 - 26030175033.84
Hypothetical proteinAC16_2592Not AvailablePositive2603365 - 260413829014.5
hypothetical proteinAC16_2593Not AvailableNegative2604304 - 26044264447.36
AcyltransferaseAC16_2594Not AvailablePositive2604689 - 260575641722.8
Tail fiber assembly proteinAC16_2595Not AvailableNegative2606017 - 260643315144.7
Tail fiber repeat proteinAC16_2596Not AvailableNegative2606433 - 260735929990.7
Tail proteinAC16_2597Not AvailableNegative2607363 - 260794721586.5
Baseplate proteinAC16_2598Not AvailableNegative2607938 - 260899638189.2
Tail proteinAC16_2599Not AvailableNegative2608983 - 26091968016.61
Terminase large subunitAC16_4371Not AvailableNegative4386171 - 438783262184.2

Displaying genes 1 – 10 of 5619 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3909 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da

Displaying 1–10 of 3909 metabolites

Health Effects

No health effects information available for this bacterium.