Helicobacter pullorum strain 229334/12

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pullorum strain 229334/12 is a Gram-negative, microaerophilic bacterium primarily found in the cecum of various hosts, including Homo sapiens (humans), Gallus gallus (domestic chickens), Aves (birds), Anser (geese), and Mammalia (mammals). This strain has been isolated from coastal and estuarine soil environments, indicating its ecological versatility and potential role in the microbial dynamics of these habitats. The organism is characterized by a single replicon, which is a fundamental aspect of its genetic architecture. The strain is cataloged under the accession number JNOC00000000.1, facilitating further research and identification within microbial databases. The presence of Helicobacter pullorum in diverse hosts, particularly those associated with agricultural settings, suggests potential implications for both human health and animal husbandry. Its microaerophilic nature indicates a preference for environments with low oxygen levels, which is consistent with its habitat in the cecum where anaerobic conditions prevail. Understanding the ecological role of Helicobacter pullorum strain 229334/12 can provide insights into microbial interactions within the gastrointestinal tracts of its hosts and the surrounding soil ecosystems. The bacterium's adaptability to coastal and estuarine soils may further imply its involvement in nutrient cycling and the maintenance of microbial diversity in these environments.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pullorum
Strainstrain 229334/12

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter pullorum strain 229334/12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcecum; coastal and estuarine soil
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pullorum strain 229334/12


Gene Summary

Adenine Count

701672 bp

Thymine Count

705924 bp

Guanine Count

380670 bp

Cytosine Count

342221 bp

Genome Length

2131353 bp

Protein-coding Genes

1984 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5s ribosomal rnaNot AvailableNot AvailablePositive40 - 155Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive165 - 280Not Available
hypothetical proteinHPU229334_00005Not AvailableNegative1 - 75029218.4
hypothetical proteinHPU229334_00010Not AvailableNegative767 - 121316935.6
5s ribosomal rnaNot AvailableNot AvailablePositive1440 - 1555Not Available
hypothetical proteinHPU229334_00015Not AvailableNegative1210 - 272157582.2
hypothetical proteinHPU229334_00020Not AvailableNegative2721 - 353332583.7
hypothetical proteinHPU229334_00030Not AvailableNegative3736 - 462633971.7
hypothetical proteinHPU229334_00035Not AvailableNegative4629 - 8159136819.0
hypothetical proteinHPU229334_00040Not AvailablePositive8365 - 888018984.1

Displaying genes 1 – 10 of 2025 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

169 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da
BASm0002282(2R)-2,3-dihydroxy-3-methylbutanoateC5H9O4Chemical structure of (2R)-2,3-dihydroxy-3-methylbutanoateNot available
Average133.1226Da
Monoisotopic133.0500838Da

Displaying 1–10 of 169 metabolites

Health Effects

No health effects information available for this bacterium.