Bacteroides uniformis str. 3978 T3 ii

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides uniformis strain 3978 T3 ii is a Gram-negative, anaerobic bacterium characterized by its rod shape and the presence of flagella. This species belongs to the genus Bacteroides, which is known for its role in the human gut microbiome. The presence of flagella suggests that B. uniformis str. 3978 T3 ii may have enhanced motility, potentially aiding in its ability to colonize specific niches within the gastrointestinal tract. With a single replicon, this strain exhibits a streamlined genetic organization, which can be advantageous for its adaptation to anaerobic environments. The anaerobic requirement indicates that it thrives in oxygen-free conditions, typical of the gut environment where it plays a significant role in the breakdown of complex carbohydrates. The accession number for this strain is JNHN00000000.1, which serves as a reference for genomic data and further research. Bacteroides uniformis is often associated with the fermentation of dietary fibers, contributing to the production of short-chain fatty acids, which are beneficial for host health. In an ecological context, the presence of Bacteroides uniformis str. 3978 T3 ii highlights the importance of anaerobic bacteria in maintaining gut health and supporting metabolic processes. Its role in fiber fermentation underscores the symbiotic relationship between humans and gut microbiota, emphasizing how specific bacteria contribute to nutrient absorption and overall well-being.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides uniformis
Strain3978 T3 ii

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides uniformis str. 3978 T3 ii
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides uniformis str. 3978 T3 ii gbf3978T3ii.contig.185,

Gene Summary

Adenine Count

1344914 bp

Thymine Count

1324424 bp

Guanine Count

1133602 bp

Cytosine Count

1170074 bp

Genome Length

4973014 bp

Protein-coding Genes

4384 genes

Non-Coding Genes

139 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tonb-linked outer membrane, susc/raga family proteinM094_4043Not AvailablePositive1020347 - 1023688124087.0
starch-binding associating with outer membrane family proteinM094_4044Not AvailablePositive1023708 - 102560671746.5
aspartate-semialdehyde dehydrogenaseM094_4045Not AvailableNegative1025679 - 102668636947.4
universal stress family proteinM094_4046Not AvailablePositive1026841 - 102897079125.0
thif family proteinM094_4047Not AvailablePositive1029029 - 102973926303.2
abc transporter family proteinM094_4048Not AvailablePositive1029804 - 103046324246.3
cna b-type domain proteinM094_4049Not AvailableNegative1030466 - 103277888218.3
competence comea helix-hairpin-helix repeat region domain proteinM094_4050Not AvailableNegative1032915 - 103386536806.1
neurotransmitter symporter family proteinM094_4051Not AvailableNegative1033872 - 103523949464.8
vanz like family proteinM094_4052Not AvailablePositive1035343 - 103572614673.3

Displaying genes 961 – 970 of 4523 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.