Bacteroides uniformis str. 3978 T3 ii

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides uniformis strain 3978 T3 ii is a Gram-negative, anaerobic bacterium characterized by its rod shape and the presence of flagella. This species belongs to the genus Bacteroides, which is known for its role in the human gut microbiome. The presence of flagella suggests that B. uniformis str. 3978 T3 ii may have enhanced motility, potentially aiding in its ability to colonize specific niches within the gastrointestinal tract. With a single replicon, this strain exhibits a streamlined genetic organization, which can be advantageous for its adaptation to anaerobic environments. The anaerobic requirement indicates that it thrives in oxygen-free conditions, typical of the gut environment where it plays a significant role in the breakdown of complex carbohydrates. The accession number for this strain is JNHN00000000.1, which serves as a reference for genomic data and further research. Bacteroides uniformis is often associated with the fermentation of dietary fibers, contributing to the production of short-chain fatty acids, which are beneficial for host health. In an ecological context, the presence of Bacteroides uniformis str. 3978 T3 ii highlights the importance of anaerobic bacteria in maintaining gut health and supporting metabolic processes. Its role in fiber fermentation underscores the symbiotic relationship between humans and gut microbiota, emphasizing how specific bacteria contribute to nutrient absorption and overall well-being.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides uniformis
Strain3978 T3 ii

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides uniformis str. 3978 T3 ii
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides uniformis str. 3978 T3 ii


Gene Summary

Adenine Count

1344914 bp

Thymine Count

1324424 bp

Guanine Count

1133602 bp

Cytosine Count

1170074 bp

Genome Length

4973014 bp

Protein-coding Genes

4384 genes

Non-Coding Genes

139 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
restriction endonuclease family proteinM094_3096Not AvailableNegative10247 - 1061213929.6
peptidase s41 family proteinM094_3097Not AvailableNegative10612 - 1241466557.8
hypothetical proteinM094_3098Not AvailablePositive12595 - 128289595.68
cytidine and deoxycytidylate deaminase zinc-binding region family proteinM094_3099Not AvailablePositive12854 - 1328815683.0
hypothetical proteinM094_3100Not AvailableNegative13313 - 1361211171.2
cdp-diacylglycerol-serine o-phosphatidyltransferaseM094_3101Not AvailableNegative13680 - 1438726288.5
phosphatidylserine decarboxylase family proteinM094_3102Not AvailableNegative14401 - 1508725729.8
dna polymerase iii, alpha subunitM094_3103Not AvailablePositive15258 - 19055143317.0
5s ribosomal rnaNot AvailableNot AvailablePositive16476 - 16583Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive16660 - 19535Not Available

Displaying genes 11 – 20 of 4523 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.