Deinococcus sp. RL

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Deinococcales

Family

Deinococcaceae

Genus

Deinococcus

Description

Deinococcus sp. RL is a notable member of the genus Deinococcus, characterized by the presence of flagella, which contributes to its motility. This species possesses a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation to its environment. The genomic data for this organism is cataloged under the accession number JMQF00000000.1. The presence of flagella in Deinococcus sp. RL suggests that it may exhibit specific ecological behaviors, such as the ability to navigate towards favorable environmental conditions or away from harmful substances. This motility could enhance its survival in diverse habitats, particularly those that may be challenging due to factors like radiation or desiccation, which are common stressors in many environments where Deinococcus species are found. Ecologically, the unique traits of Deinococcus sp. RL may play a significant role in its interactions within microbial communities, as its motility could influence its ability to colonize new niches or compete for resources. This species may contribute to biogeochemical cycles or help in the bioremediation of contaminated sites due to its resilience and adaptability. Understanding the characteristics of Deinococcus sp. RL provides insights into the evolutionary strategies of extremophiles and their potential applications in biotechnology and environmental science.

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderDeinococcales
FamilyDeinococcaceae
GenusDeinococcus
SpeciesDeinococcus sp. RL
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Deinococcus sp. RL contig062, whole genome shotgun sequence.

Gene Summary

Adenine Count

426772 bp

Thymine Count

427823 bp

Guanine Count

969873 bp

Cytosine Count

967599 bp

Genome Length

2792068 bp

Protein-coding Genes

2614 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphate transport system permease pstaRDMS_07385Not AvailableNegative1480445 - 148123327408.9
phosphate abc transporter permeaseRDMS_07390Not AvailableNegative1481308 - 148231536091.6
phosphate abc transporter substrate-binding proteinRDMS_07395Not AvailableNegative1482452 - 148348636409.6
antibiotic abc transporter atp-binding proteinRDMS_07400Not AvailableNegative1483607 - 148548469063.6
abc transporter atp-binding proteinRDMS_07405Not AvailableNegative1485481 - 148740370394.4
Trna-thrNot AvailableNot AvailablePositive1487748 - 1487823Not Available
Trna-tyrNot AvailableNot AvailablePositive1487866 - 1487951Not Available
Trna-glyNot AvailableNot AvailablePositive1487955 - 1488027Not Available
Trna-thrNot AvailableNot AvailablePositive1488034 - 1488108Not Available
elongation factor tuRDMS_07430Not AvailablePositive1488244 - 148941843042.4

Displaying genes 1441 – 1450 of 2673 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.