Leminorella grimontii ATCC 33999 = DSM 5078 strain ATCC 33999

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Budviciaceae

Genus

Leminorella

Description

Leminorella grimontii ATCC 33999, also designated as DSM 5078, is a Gram-negative bacterium characterized by a single replicon. This strain is part of a broader classification of bacteria that often exhibit significant metabolic diversity and ecological roles. The strain is cataloged under the accession number JMPN00000000.1, which provides a reference for genetic and genomic studies. Being Gram-negative, Leminorella grimontii possesses a thin peptidoglycan layer surrounded by an outer membrane, which is characteristic of its classification. This structural feature may influence its interactions with the environment and its adaptability to various ecological niches. Understanding the characteristics of Leminorella grimontii, particularly its single replicon structure, can offer insights into its genomic stability and replication mechanisms. The presence of a single replicon may suggest a streamlined genomic organization that could be advantageous in certain environmental conditions, potentially affecting its resilience and ecological adaptability. In summary, Leminorella grimontii ATCC 33999 stands out for its Gram-negative nature and unique genomic characteristics. These traits could play a critical role in its biological interactions and ecological functions, highlighting the importance of studying such strains in the context of microbial ecology and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyBudviciaceae
GenusLeminorella
SpeciesLeminorella grimontii
StrainATCC 33999 = DSM 5078 strain ATCC 33999

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leminorella grimontii ATCC 33999 = DSM 5078 strain ATCC 33999

Gene Summary

Adenine Count

972673 bp

Thymine Count

980468 bp

Guanine Count

1140355 bp

Cytosine Count

1142116 bp

Genome Length

4235612 bp

Protein-coding Genes

3662 genes

Non-Coding Genes

160 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinGLGR_0421Not AvailablePositive475473 - 47596718922.0
periplasmic substrate-binding component of an abc superfamily molybdenum transporterGLGR_0422Not AvailablePositive476084 - 47683626580.2
permease component of an abc superfamily molybdenum transporterGLGR_0423Not AvailablePositive476843 - 47763127704.5
atp-binding component of an abc superfamily ferric iron transporterGLGR_0424Not AvailablePositive477618 - 47823222479.2
hypothetical proteinGLGR_0425Not AvailableNegative478249 - 47912733101.4
nucleoside diphosphate kinaseGLGR_0426Not AvailablePositive479391 - 47981615170.0
ribosomal rna large subunit methyltransferase nGLGR_0427Not AvailablePositive480105 - 48127143412.4
pilf family type iv pilus biogenesis proteinGLGR_0428Not AvailablePositive481347 - 48209927938.1
putative membrane proteinGLGR_0429Not AvailablePositive482164 - 48304831563.5
1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthaseGLGR_0430Not AvailablePositive483087 - 48420240475.9

Displaying genes 541 – 550 of 3822 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

326 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da

Displaying 1–10 of 326 metabolites

Health Effects

Health ConditionRelationReference
Urinary tract infectionCausesPMC6083913

Displaying health effects 1 – 1 of 1 in total