Erythrobacter litoralis strain DSM 8509

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Erythrobacter

Description

Erythrobacter litoralis strain DSM 8509 is a Gram-negative, aerobic, rod-shaped bacterium that exhibits motility. This organism is classified as an organotroph and chemotroph, indicating its ability to derive energy from organic compounds through chemical processes. It thrives optimally at a temperature of 29°C, placing it within the mesophilic temperature range, which is characteristic of organisms that grow best at moderate temperatures. The strain possesses a single replicon, which is relevant for its genetic stability and replication processes. The genomic accession for Erythrobacter litoralis strain DSM 8509 is JMIX00000000.1, which allows for further studies and comparisons within microbial databases. From a biological and ecological perspective, the traits of Erythrobacter litoralis DSM 8509 suggest its role in coastal environments, where it can contribute to the degradation of organic matter and nutrient cycling. Its aerobic metabolism and organotrophic lifestyle indicate that it may play a significant role in the microbial communities associated with marine ecosystems, particularly in sediment and water column interactions. This highlights the importance of Erythrobacter litoralis in maintaining ecological balance and nutrient dynamics in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusErythrobacter
SpeciesErythrobacter litoralis
Strainstrain DSM 8509

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceorganotroph; chemotroph
PathogenicityNot Available

Genome Summary

Erythrobacter litoralis strain DSM 8509 contig22, whole genome

Gene Summary

Adenine Count

560416 bp

Thymine Count

558562 bp

Guanine Count

1049378 bp

Cytosine Count

1045515 bp

Genome Length

3213871 bp

Protein-coding Genes

2981 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphate abc transporter substrate-binding proteinEH32_09160Not AvailableNegative1011281 - 101233636705.8
phosphate abc transporter substrate-binding proteinEH32_09165Not AvailableNegative1012401 - 101356141088.2
diguanylate cyclaseEH32_09170Not AvailablePositive1013909 - 101567264205.7
thioesteraseEH32_09175Not AvailableNegative1015669 - 101607915316.9
peptidase s9EH32_09180Not AvailableNegative1016076 - 101831682702.4
x-pro aminopeptidaseEH32_09185Not AvailablePositive1018457 - 102026865412.7
glyoxalaseEH32_09190Not AvailablePositive1020360 - 102074313555.9
hypothetical proteinEH32_09195Not AvailablePositive1020884 - 102156723835.5
chemotaxis protein cheyEH32_09200Not AvailablePositive1021629 - 102237527824.5
hypothetical proteinEH32_09205Not AvailablePositive1022372 - 102382651907.0

Displaying genes 961 – 970 of 3031 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

53 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da
BASm0002305(S)-2-ethyl-2-hydroxy-3-oxobutanoateC6H9O4Chemical structure of (S)-2-ethyl-2-hydroxy-3-oxobutanoateNot available
Average145.135Da
Monoisotopic145.0506324Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0002858all-trans-undecaprenyl phosphateC55H89O4PChemical structure of all-trans-undecaprenyl phosphateNot available
Average845.288Da
Monoisotopic844.6509455Da

Displaying 1–10 of 53 metabolites

Health Effects

No health effects information available for this bacterium.