Bifidobacterium thermacidophilum subsp. thermacidophilum strain

Rodanaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium thermacidophilum subsp. thermacidophilum is a Gram-positive, anaerobic bacterium characterized by its rod shape and the presence of flagella. This strain has been noted for its unique adaptation to acidic environments, which is reflected in its name, as it thrives under thermophilic conditions. The strain is part of the gut microbiota of Homo sapiens and is also associated with Metazoa, suggesting a potential role in the digestive processes of these hosts. The presence of flagella may enhance its mobility within the gut environment, allowing it to colonize more effectively and interact with other microbial species. Bifidobacterium thermacidophilum subsp. thermacidophilum has a single replicon, indicating a streamlined genetic organization that is typical for many bacteria within its genus. This trait could reflect an evolutionary adaptation to its niche, optimizing its survival in competitive environments. The ecological significance of this strain may lie in its contribution to gut health. Bifidobacteria are generally recognized for their probiotic properties, which include the modulation of gut microbiota composition and the enhancement of gut barrier function. Therefore, Bifidobacterium thermacidophilum subsp. thermacidophilum may play a beneficial role in maintaining homeostasis within the gastrointestinal tract of its hosts, underscoring the intertwined relationships between specific microorganisms and their hosts in complex ecosystems. Accession number for this strain is JGZT00000000.1, which provides a reference for further genomic studies.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium thermacidophilum
Strainsubsp. thermacidophilum strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bifidobacterium thermacidophilum subsp. thermacidophilum strain
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium thermacidophilum subsp. thermacidophilum strain

Gene Summary

Adenine Count

433527 bp

Thymine Count

451184 bp

Guanine Count

684127 bp

Cytosine Count

664234 bp

Genome Length

2233072 bp

Protein-coding Genes

1811 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphatidylinositol alpha-mannosyltransferaseTHER5_1203Not AvailablePositive963438 - 96460741994.6
dna gyrase subunit bTHER5_1204Not AvailableNegative964768 - 96713786223.8
rna polymerase sigma factorTHER5_1205Not AvailableNegative967234 - 96874255904.2
hypothetical proteinTHER5_1206Not AvailableNegative968901 - 96972531278.4
polyprenyl synthaseTHER5_1207Not AvailablePositive970033 - 97110938207.6
serine/threonine-protein kinase pkna2THER5_1208Not AvailablePositive971202 - 97348481013.2
1-acyl-sn-glycerol-3-phosphate acyltransferaseTHER5_1209Not AvailableNegative973465 - 97418426470.9
hypothetical proteinTHER5_1210Not AvailablePositive974237 - 97480920337.6
anthranilate phosphoribosyltransferaseTHER5_1211Not AvailableNegative975137 - 97618636269.3
protein translocase subunit secaTHER5_1212Not AvailableNegative976511 - 979390107083.0

Displaying genes 851 – 860 of 1880 in total

Metabolites

239 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0002143menaquinone-7C46H64O2Chemical structure of menaquinone-7Not available
Average648.9992Da
Monoisotopic648.4906313Da
BASm0002197D-arabinoseC5H10O5Chemical structure of D-arabinoseNot available
Average150.1299Da
Monoisotopic150.05282343Da

Displaying 1–10 of 239 metabolites

Health Effects

No health effects information available for this bacterium.