Bifidobacterium porcinum strain LMG 21689

Rodanaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium porcinum strain LMG 21689 is an anaerobic bacterium characterized by its rod shape and the presence of flagella, which may facilitate its movement in anaerobic environments. This strain is associated with the host Sus scrofa, commonly known as the domestic pig. Its adaptation to an anaerobic lifestyle suggests a specialized role in the gut microbiota of swine, where oxygen levels are typically low. The genome of Bifidobacterium porcinum strain LMG 21689 is represented by a single replicon, which is indicative of its genomic organization and may reflect its evolutionary adaptations. The accession number for its genomic data is JGZS00000000.1, providing a reference for researchers interested in further genetic and functional studies. Understanding the ecological role of Bifidobacterium porcinum in the gastrointestinal tract of pigs can provide insights into its contribution to gut health and nutrition in these animals. As a member of the gut microbiome, this strain may play a role in digestion and the modulation of the immune system, potentially affecting the overall health and productivity of its host. Further research could elucidate its specific functions and interactions within the microbiome, as well as its potential applications in veterinary microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium porcinum
Strainstrain LMG 21689

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Sus scrofa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium porcinum strain LMG 21689 Contig3, whole genome

Gene Summary

Adenine Count

415435 bp

Thymine Count

412197 bp

Guanine Count

625190 bp

Cytosine Count

626545 bp

Genome Length

2079368 bp

Protein-coding Genes

1738 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
radical sam family enzymeBPORC_0560Not AvailableNegative885004 - 88620043497.9
phosphatidate cytidylyltransferaseBPORC_0561Not AvailableNegative886290 - 88727335416.3
ribosome recycling factorBPORC_0562Not AvailableNegative887358 - 88791220400.3
uridylate kinaseBPORC_0563Not AvailableNegative888003 - 88874326372.0
protein translation elongation factor ts (ef-ts)BPORC_0564Not AvailableNegative888979 - 88985731082.9
rpsb ssu ribosomal protein s2pBPORC_0565Not AvailableNegative889943 - 89075830203.5
peptide deformylaseBPORC_0566Not AvailableNegative890992 - 89147418015.7
long-chain-fatty acid coa ligaseBPORC_0567Not AvailableNegative891478 - 89353575126.9
hypothetical proteinBPORC_0568Not AvailableNegative893591 - 89409719459.9
inosine 5-monophosphate dehydrogenaseBPORC_0570Not AvailableNegative894228 - 89534939782.6

Displaying genes 791 – 800 of 1791 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.