Bifidobacterium porcinum strain LMG 21689

Rodanaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium porcinum strain LMG 21689 is an anaerobic bacterium characterized by its rod shape and the presence of flagella, which may facilitate its movement in anaerobic environments. This strain is associated with the host Sus scrofa, commonly known as the domestic pig. Its adaptation to an anaerobic lifestyle suggests a specialized role in the gut microbiota of swine, where oxygen levels are typically low. The genome of Bifidobacterium porcinum strain LMG 21689 is represented by a single replicon, which is indicative of its genomic organization and may reflect its evolutionary adaptations. The accession number for its genomic data is JGZS00000000.1, providing a reference for researchers interested in further genetic and functional studies. Understanding the ecological role of Bifidobacterium porcinum in the gastrointestinal tract of pigs can provide insights into its contribution to gut health and nutrition in these animals. As a member of the gut microbiome, this strain may play a role in digestion and the modulation of the immune system, potentially affecting the overall health and productivity of its host. Further research could elucidate its specific functions and interactions within the microbiome, as well as its potential applications in veterinary microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium porcinum
Strainstrain LMG 21689

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Sus scrofa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium porcinum strain LMG 21689 Contig3, whole genome

Gene Summary

Adenine Count

415435 bp

Thymine Count

412197 bp

Guanine Count

625190 bp

Cytosine Count

626545 bp

Genome Length

2079368 bp

Protein-coding Genes

1738 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction dna helicase ruvbBPORC_0520Not AvailablePositive845137 - 84620138847.6
preprotein translocase, yajc subunitBPORC_0521Not AvailablePositive846246 - 84675218421.4
adenine phosphoribosyltransferaseBPORC_0522Not AvailablePositive846833 - 84741120390.7
succinyl-coa synthetase beta chainBPORC_0523Not AvailablePositive847432 - 84863442775.4
succinyl-coa synthetase alpha chainBPORC_0524Not AvailablePositive848631 - 84955431304.2
hypothetical proteinBPORC_0525Not AvailablePositive849551 - 85082246182.5
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseBPORC_0526Not AvailablePositive850897 - 85253158931.6
hypothetical proteinBPORC_0528Not AvailablePositive852882 - 85316910242.9
major intrinsic proteinBPORC_0529Not AvailableNegative853134 - 85409632685.2
rlub ribosomal large subunit pseudouridine synthase bBPORC_0530Not AvailablePositive854332 - 85510528961.1

Displaying genes 751 – 760 of 1791 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.