Bifidobacterium stellenboschense strain DSM 23968

Rodanaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium stellenboschense strain DSM 23968 is an anaerobic, rod-shaped bacterium, characterized by its capacity to thrive in environments devoid of oxygen. This strain possesses a single replicon, indicating a streamlined genetic structure. Notably, it is equipped with flagella, which suggests potential motility, although the ecological implications of this trait in anaerobic conditions remain to be fully understood. The strain is cataloged under the accession number JGZP00000000.1, which serves as a unique identifier for genomic data associated with this organism. Bifidobacterium species are widely recognized for their role in the gut microbiota, contributing to digestive health and overall well-being in various hosts. Analyzing the anaerobic nature of Bifidobacterium stellenboschense, it is likely adapted to specific niches within the gastrointestinal tract, where oxygen levels are minimal. The presence of flagella may provide advantages in colonization or interaction with other microbial communities, although the specific ecological roles of motility in such an environment require further exploration. In summary, Bifidobacterium stellenboschense strain DSM 23968 exemplifies a specialized microbial entity with unique adaptations for survival and function in anaerobic habitats, highlighting the intricate dynamics of gut microbiota and the potential for beneficial interactions within this ecosystem.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium stellenboschense
Strainstrain DSM 23968

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium stellenboschense strain DSM 23968 Contig40, whole

Gene Summary

Adenine Count

491036 bp

Thymine Count

483851 bp

Guanine Count

918245 bp

Cytosine Count

919715 bp

Genome Length

2812864 bp

Protein-coding Genes

2180 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thymidylate synthaseBSTEL_1448Not AvailableNegative172159 - 17303433284.6
peroxiredoxinBSTEL_1449Not AvailablePositive173191 - 17360415048.7
universal stress proteinBSTEL_1450Not AvailableNegative173999 - 17502736402.9
nlpc/p60 family proteinBSTEL_1451Not AvailableNegative175238 - 17597825428.4
amidaseBSTEL_1452Not AvailableNegative176118 - 17713435524.9
phosphoserine aminotransferaseBSTEL_1453Not AvailablePositive177444 - 17858640344.3
hypothetical proteinBSTEL_1454Not AvailablePositive178639 - 1788999664.23
atpaseBSTEL_1455Not AvailableNegative179141 - 18043946778.6
phou family transcriptional regulatorBSTEL_1456Not AvailablePositive180599 - 18134527730.0
phosphoglycerate mutaseBSTEL_1457Not AvailableNegative181940 - 18268027646.8

Displaying genes 171 – 180 of 2271 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00032855-methyltetrahydropteroyltri-L-glutamateC30H35N9O12Chemical structure of 5-methyltetrahydropteroyltri-L-glutamateNot available
Average713.663Da
Monoisotopic713.2427119Da
BASm00035255-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideC15H21N5O15P2Chemical structure of 5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideNot available
Average573.303Da
Monoisotopic573.0531333Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.