Bifidobacterium stellenboschense strain DSM 23968

Rodanaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium stellenboschense strain DSM 23968 is an anaerobic, rod-shaped bacterium, characterized by its capacity to thrive in environments devoid of oxygen. This strain possesses a single replicon, indicating a streamlined genetic structure. Notably, it is equipped with flagella, which suggests potential motility, although the ecological implications of this trait in anaerobic conditions remain to be fully understood. The strain is cataloged under the accession number JGZP00000000.1, which serves as a unique identifier for genomic data associated with this organism. Bifidobacterium species are widely recognized for their role in the gut microbiota, contributing to digestive health and overall well-being in various hosts. Analyzing the anaerobic nature of Bifidobacterium stellenboschense, it is likely adapted to specific niches within the gastrointestinal tract, where oxygen levels are minimal. The presence of flagella may provide advantages in colonization or interaction with other microbial communities, although the specific ecological roles of motility in such an environment require further exploration. In summary, Bifidobacterium stellenboschense strain DSM 23968 exemplifies a specialized microbial entity with unique adaptations for survival and function in anaerobic habitats, highlighting the intricate dynamics of gut microbiota and the potential for beneficial interactions within this ecosystem.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium stellenboschense
Strainstrain DSM 23968

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium stellenboschense strain DSM 23968 Contig40, whole

Gene Summary

Adenine Count

491036 bp

Thymine Count

483851 bp

Guanine Count

918245 bp

Cytosine Count

919715 bp

Genome Length

2812864 bp

Protein-coding Genes

2180 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atpaseBSTEL_1801Not AvailableNegative1673968 - 167515845567.4
glycosyl hydrolase family 25BSTEL_1802Not AvailablePositive1675859 - 167794673836.2
putative mcrbc 5-methylcytosine restriction system componentBSTEL_1803Not AvailableNegative1678058 - 167947654604.3
putative endonucleaseBSTEL_1804Not AvailableNegative1679500 - 168093654198.6
bifunctional urease subunit gamma/betaBSTEL_1805Not AvailableNegative1681439 - 168187616273.5
transposaseBSTEL_1806Not AvailableNegative1681975 - 168249320154.5
transposaseBSTEL_1807Not AvailableNegative1682490 - 168323327814.3
hypothetical proteinBSTEL_1808Not AvailableNegative1683403 - 168512164269.8
type ii restriction endonuclease bsubiBSTEL_1809Not AvailableNegative1685234 - 168613633554.0
modification methylaseBSTEL_1810Not AvailableNegative1686118 - 168752451919.1

Displaying genes 1401 – 1410 of 2271 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00032855-methyltetrahydropteroyltri-L-glutamateC30H35N9O12Chemical structure of 5-methyltetrahydropteroyltri-L-glutamateNot available
Average713.663Da
Monoisotopic713.2427119Da
BASm00035255-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideC15H21N5O15P2Chemical structure of 5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideNot available
Average573.303Da
Monoisotopic573.0531333Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.