Burkholderia sp. lig30

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia sp. lig30 is characterized by having a single replicon, indicating a streamlined genomic structure. The organism is cataloged under the accession number JGVW00000000.1, which serves as a reference for its genetic data. Burkholderia species are known for their diverse metabolic capabilities and ecological roles, often found in various environments, including soil and water. This genus is also notable for its interactions with plants and its potential applications in bioremediation and agriculture. However, specific traits and ecological roles of Burkholderia sp. lig30 are not detailed in the available data. The presence of a single replicon in Burkholderia sp. lig30 may suggest a specialization that could be advantageous in certain ecological niches. This trait might allow for efficient replication and maintenance of essential genes, potentially enhancing its adaptability to specific environmental conditions. Understanding the genomic structure and traits of Burkholderia sp. lig30 can provide insights into its ecological interactions and potential applications in biotechnology. Further studies could elucidate its specific roles in the ecosystem and its interactions with other microorganisms or plants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia sp. lig30
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia sp. lig30 ctg9, whole genome shotgun sequence.

Gene Summary

Adenine Count

927376 bp

Thymine Count

919950 bp

Guanine Count

1835782 bp

Cytosine Count

1830437 bp

Genome Length

5513545 bp

Protein-coding Genes

4950 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protocatechuate 3,4-dioxygenase, beta subunitLIG30_3658Not AvailableNegative4038692 - 403941727281.4
transcriptional regulator, iclr familyLIG30_3659Not AvailableNegative4039776 - 404065730787.0
major facilitator superfamily mfs_1LIG30_3660Not AvailableNegative4040816 - 404222249275.9
xylose isomerase domain-containing protein tim barrelLIG30_3661Not AvailableNegative4042323 - 404315629825.0
nipsnap family containing proteinLIG30_3662Not AvailableNegative4043201 - 404381222125.7
fumarate reductase/succinate dehydrogenase flavoprotein domain proteinLIG30_3663Not AvailableNegative4043799 - 404555661611.5
nad-dependent epimerase/dehydrataseLIG30_3664Not AvailablePositive4045695 - 404659130799.0
oxidoreductase domain proteinLIG30_3665Not AvailableNegative4046611 - 404765137378.4
hypothetical proteinLIG30_3666Not AvailablePositive4047852 - 404915046725.7
abc-type transporter, integral membrane subunitLIG30_3667Not AvailablePositive4049287 - 405015630068.3

Displaying genes 3711 – 3720 of 5061 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.