Burkholderia sp. lig30

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia sp. lig30 is characterized by having a single replicon, indicating a streamlined genomic structure. The organism is cataloged under the accession number JGVW00000000.1, which serves as a reference for its genetic data. Burkholderia species are known for their diverse metabolic capabilities and ecological roles, often found in various environments, including soil and water. This genus is also notable for its interactions with plants and its potential applications in bioremediation and agriculture. However, specific traits and ecological roles of Burkholderia sp. lig30 are not detailed in the available data. The presence of a single replicon in Burkholderia sp. lig30 may suggest a specialization that could be advantageous in certain ecological niches. This trait might allow for efficient replication and maintenance of essential genes, potentially enhancing its adaptability to specific environmental conditions. Understanding the genomic structure and traits of Burkholderia sp. lig30 can provide insights into its ecological interactions and potential applications in biotechnology. Further studies could elucidate its specific roles in the ecosystem and its interactions with other microorganisms or plants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia sp. lig30
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia sp. lig30 ctg9, whole genome shotgun sequence.

Gene Summary

Adenine Count

927376 bp

Thymine Count

919950 bp

Guanine Count

1835782 bp

Cytosine Count

1830437 bp

Genome Length

5513545 bp

Protein-coding Genes

4950 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cyclohexanecarboxyl-coa dehydrogenaseLIG30_2985Not AvailableNegative3175205 - 317635641777.3
2-ketocyclohexanecarboxyl-coa hydrolaseLIG30_2986Not AvailableNegative3176435 - 317721728665.3
2-hydroxycyclohexanecarboxyl-coa dehydrogenaseLIG30_2987Not AvailableNegative3177240 - 317800726399.7
transcriptional regulator, marr familyLIG30_2988Not AvailablePositive3178146 - 317865519317.0
diguanylate cyclaseLIG30_2989Not AvailableNegative3178719 - 318014652053.1
ompw family proteinLIG30_2990Not AvailableNegative3180521 - 318124325361.1
long-chain-fatty-acid--coa ligaseLIG30_2991Not AvailableNegative3181380 - 318301457695.6
transcriptional regulator, arac familyLIG30_2992Not AvailablePositive3183426 - 318455041065.0
transcriptional regulator, arac familyLIG30_2993Not AvailablePositive3184543 - 318535230018.0
threonine aldolaseLIG30_2994Not AvailablePositive3185494 - 318658838806.9

Displaying genes 2911 – 2920 of 5061 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.