Petrotoga sp. HKA.pet.4.5

Kingdom

Thermotogati

Phylum

Thermotogota

Class

Thermotogae

Order

Petrotogales

Family

Petrotogaceae

Genus

Petrotoga

Description

Petrotoga sp. HKA.pet.4.5 is a bacterium characterized by its possession of flagella, indicating it is motile. This feature is essential for its ecological interactions, as motility can influence its ability to colonize environments and access nutrients. The organism has a single replicon, suggesting a streamlined genetic organization, which may be advantageous for efficient replication and adaptability. The complete genome of Petrotoga sp. HKA.pet.4.5 is documented in the accession JGVM00000000.1. This genomic information can facilitate further research into the metabolic pathways and ecological roles of this bacterium, especially in its native environments, which may include hydrocarbon-rich settings. In a broader ecological context, the presence of flagella may enable Petrotoga sp. HKA.pet.4.5 to engage in interactions with other microorganisms and contribute to biogeochemical cycles, particularly in environments where hydrocarbons are present. Understanding its motility and genetic structure may provide insights into its role in the degradation of complex organic compounds, highlighting the potential of this organism in bioremediation efforts.

Taxonomy

KingdomThermotogati
PhylumThermotogota
ClassThermotogae
OrderPetrotogales
FamilyPetrotogaceae
GenusPetrotoga
SpeciesPetrotoga sp. HKA.pet.4.5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Petrotoga sp. HKA.pet.4.5 contig_34, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1589 genes

Non-Coding Genes

217 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-acetylglucosamine-6-phosphate deacetylaseCN13_07765Not AvailableNegative1621639 - 162273040453.4
sugar isomeraseCN13_07770Not AvailableNegative1622745 - 162366534672.0
gntr family transcriptional regulatorCN13_07775Not AvailableNegative1623692 - 162441728166.9
hypothetical proteinCN13_07780Not AvailablePositive1624566 - 162525527334.0
Trna-valNot AvailableNot AvailablePositive1625339 - 1625413Not Available
peptide abc transporter substrate-binding proteinCN13_07790Not AvailablePositive1625772 - 162762570423.6
peptide abc transporter permeaseCN13_07795Not AvailablePositive1627749 - 162878638710.3
abc transporter permeaseCN13_07800Not AvailablePositive1628797 - 163012250052.8
peptide abc transporter atp-binding proteinCN13_07805Not AvailablePositive1630142 - 163116138401.5
peptide abc transporter atp-binding proteinCN13_07810Not AvailablePositive1631161 - 163233944331.1

Displaying genes 1441 – 1450 of 1806 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.