Bacteroides fragilis str. S6L5

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis str. S6L5 is a Gram-negative, rod-shaped bacterium that is categorized as an anaerobe, meaning it thrives in environments devoid of oxygen. It typically exists in a single-cell arrangement and is classified as a chemoorganotroph, utilizing organic compounds as its energy source. This organism is free-living, indicating it does not rely on a host for survival despite being host-associated. Bacteroides fragilis str. S6L5 has a mesophilic optimal temperature of 37°C, which is consistent with the human body temperature, suggesting a potential ecological niche within the human gut microbiome. The bacterium possesses flagella, although it is noted to be non-motile. It features a complex cellular structure with two membranes and a single replicon. The presence of Bacteroides fragilis str. S6L5 in the microbiome is significant, as members of the Bacteroides genus are known for their roles in the decomposition of complex polysaccharides, contributing to gut health and nutrient absorption. The ability to survive in anaerobic conditions and its free-living nature may also indicate a resilience that allows it to adapt to fluctuations in the gut environment. Overall, the traits of Bacteroides fragilis str. S6L5 highlight its potential importance in maintaining a balanced gut microbiota and its role in human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
StrainS6L5

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis str. S6L5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Bacteroides fragilis str. S6L5 gbfS6L5.contig.249, whole genome

Gene Summary

Adenine Count

1827874 bp

Thymine Count

1838346 bp

Guanine Count

1359568 bp

Cytosine Count

1362823 bp

Genome Length

6388611 bp

Protein-coding Genes

5777 genes

Non-Coding Genes

165 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation initiation factor if-2M127_5182Not AvailablePositive516006 - 51863095969.0
ribosome-binding factor aM127_5183Not AvailablePositive518637 - 51899914007.0
trna pseudouridine(55) synthaseM127_5184Not AvailablePositive519040 - 51974726495.3
riboflavin biosynthesis protein ribfM127_5185Not AvailablePositive519731 - 52064233899.0
gtp-dependent nucleic acid-binding protein engdM127_5186Not AvailableNegative520620 - 52171139681.6
flhb hrpn yscu spas family proteinM127_5187Not AvailablePositive522402 - 52308525715.8
type iii secretion, hrcv family proteinM127_5188Not AvailablePositive523085 - 52521177959.3
type iii secretion regulator yopn/lcre/inve/mxicM127_5189Not AvailablePositive525239 - 52643843297.8
tir chaperone family proteinM127_5190Not AvailablePositive526455 - 52689516423.8
4-alpha-glucanotransferaseM127_5191Not AvailablePositive527012 - 52860161993.9

Displaying genes 531 – 540 of 5942 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.