Bacteroides fragilis str. S6L5

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis str. S6L5 is a Gram-negative, rod-shaped bacterium that is categorized as an anaerobe, meaning it thrives in environments devoid of oxygen. It typically exists in a single-cell arrangement and is classified as a chemoorganotroph, utilizing organic compounds as its energy source. This organism is free-living, indicating it does not rely on a host for survival despite being host-associated. Bacteroides fragilis str. S6L5 has a mesophilic optimal temperature of 37°C, which is consistent with the human body temperature, suggesting a potential ecological niche within the human gut microbiome. The bacterium possesses flagella, although it is noted to be non-motile. It features a complex cellular structure with two membranes and a single replicon. The presence of Bacteroides fragilis str. S6L5 in the microbiome is significant, as members of the Bacteroides genus are known for their roles in the decomposition of complex polysaccharides, contributing to gut health and nutrient absorption. The ability to survive in anaerobic conditions and its free-living nature may also indicate a resilience that allows it to adapt to fluctuations in the gut environment. Overall, the traits of Bacteroides fragilis str. S6L5 highlight its potential importance in maintaining a balanced gut microbiota and its role in human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
StrainS6L5

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis str. S6L5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Bacteroides fragilis str. S6L5 gbfS6L5.contig.249, whole genome

Gene Summary

Adenine Count

1827874 bp

Thymine Count

1838346 bp

Guanine Count

1359568 bp

Cytosine Count

1362823 bp

Genome Length

6388611 bp

Protein-coding Genes

5777 genes

Non-Coding Genes

165 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i phosphodiesterase / nucleotide pyrophosphatase family proteinM127_3727Not AvailableNegative5377534 - 537845734274.3
calcineurin-like phosphoesterase family proteinM127_3728Not AvailableNegative5378471 - 538092789942.9
starch-binding associating with outer membrane family proteinM127_3729Not AvailableNegative5381032 - 538274165272.2
tonb-linked outer membrane, susc/raga family proteinM127_3730Not AvailableNegative5382838 - 5386284128832.0
fecr family proteinM127_3731Not AvailableNegative5386445 - 538747039390.3
rna polymerase sigma-70 factor, expansion 1 family proteinM127_3732Not AvailableNegative5387545 - 538811722456.1
hypothetical proteinM127_3733Not AvailableNegative5388183 - 53883205105.89
starch-binding associating with outer membrane family proteinM127_3734Not AvailableNegative5388953 - 539079469854.8
tonb-linked outer membrane, susc/raga family proteinM127_3735Not AvailableNegative5390817 - 5394032120206.0
hypothetical proteinM127_3736Not AvailablePositive5394582 - 53947406107.46

Displaying genes 5011 – 5020 of 5942 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.