Bacteroides fragilis str. S6L5

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis str. S6L5 is a Gram-negative, rod-shaped bacterium that is categorized as an anaerobe, meaning it thrives in environments devoid of oxygen. It typically exists in a single-cell arrangement and is classified as a chemoorganotroph, utilizing organic compounds as its energy source. This organism is free-living, indicating it does not rely on a host for survival despite being host-associated. Bacteroides fragilis str. S6L5 has a mesophilic optimal temperature of 37°C, which is consistent with the human body temperature, suggesting a potential ecological niche within the human gut microbiome. The bacterium possesses flagella, although it is noted to be non-motile. It features a complex cellular structure with two membranes and a single replicon. The presence of Bacteroides fragilis str. S6L5 in the microbiome is significant, as members of the Bacteroides genus are known for their roles in the decomposition of complex polysaccharides, contributing to gut health and nutrient absorption. The ability to survive in anaerobic conditions and its free-living nature may also indicate a resilience that allows it to adapt to fluctuations in the gut environment. Overall, the traits of Bacteroides fragilis str. S6L5 highlight its potential importance in maintaining a balanced gut microbiota and its role in human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
StrainS6L5

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis str. S6L5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Bacteroides fragilis str. S6L5 gbfS6L5.contig.249, whole genome

Gene Summary

Adenine Count

1827874 bp

Thymine Count

1838346 bp

Guanine Count

1359568 bp

Cytosine Count

1362823 bp

Genome Length

6388611 bp

Protein-coding Genes

5777 genes

Non-Coding Genes

165 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
wgr domain proteinM127_1921Not AvailablePositive3498892 - 349995640011.8
atp-grasp domain proteinM127_1922Not AvailablePositive3499961 - 350097137918.5
type i phosphodiesterase / nucleotide pyrophosphatase family proteinM127_1923Not AvailablePositive3500958 - 350180932223.1
radical sam superfamily proteinM127_1924Not AvailablePositive3501806 - 350308648790.3
sucrose-6f-phosphate phosphohydrolase family proteinM127_1925Not AvailablePositive3503109 - 350461156053.7
nad binding domain of 6-phosphogluconate dehydrogenase family proteinM127_1926Not AvailableNegative3504614 - 350557035345.6
sigma-54 interaction domain proteinM127_1927Not AvailableNegative3505654 - 350692547386.1
f5/8 type c domain proteinM127_1928Not AvailableNegative3506949 - 350954396873.6
hypothetical proteinM127_1929Not AvailableNegative3509579 - 35097105123.45
cna b-type domain proteinM127_1930Not AvailableNegative3509695 - 351213993580.6

Displaying genes 3231 – 3240 of 5942 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.