Bacteroides fragilis str. S6L5

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis str. S6L5 is a Gram-negative, rod-shaped bacterium that is categorized as an anaerobe, meaning it thrives in environments devoid of oxygen. It typically exists in a single-cell arrangement and is classified as a chemoorganotroph, utilizing organic compounds as its energy source. This organism is free-living, indicating it does not rely on a host for survival despite being host-associated. Bacteroides fragilis str. S6L5 has a mesophilic optimal temperature of 37°C, which is consistent with the human body temperature, suggesting a potential ecological niche within the human gut microbiome. The bacterium possesses flagella, although it is noted to be non-motile. It features a complex cellular structure with two membranes and a single replicon. The presence of Bacteroides fragilis str. S6L5 in the microbiome is significant, as members of the Bacteroides genus are known for their roles in the decomposition of complex polysaccharides, contributing to gut health and nutrient absorption. The ability to survive in anaerobic conditions and its free-living nature may also indicate a resilience that allows it to adapt to fluctuations in the gut environment. Overall, the traits of Bacteroides fragilis str. S6L5 highlight its potential importance in maintaining a balanced gut microbiota and its role in human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
StrainS6L5

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis str. S6L5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Bacteroides fragilis str. S6L5 gbfS6L5.contig.249, whole genome

Gene Summary

Adenine Count

1827874 bp

Thymine Count

1838346 bp

Guanine Count

1359568 bp

Cytosine Count

1362823 bp

Genome Length

6388611 bp

Protein-coding Genes

5777 genes

Non-Coding Genes

165 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative outer membrane protein, probably involved in nutrient binding proteinM127_0630Not AvailablePositive2088249 - 208975155822.6
tonb-linked outer membrane, susc/raga family proteinM127_0631Not AvailablePositive2090268 - 2093171105689.0
starch-binding associating with outer membrane family proteinM127_0632Not AvailablePositive2093206 - 209460051947.8
gtp-binding protein hflxM127_0633Not AvailablePositive2094717 - 209597047518.5
hypothetical proteinM127_0634Not AvailablePositive2095995 - 209798674165.1
peptidase m1 family proteinM127_0635Not AvailablePositive2098016 - 210052996400.0
fumarate hydratase class i, anaerobicM127_0636Not AvailablePositive2100953 - 210259960237.2
acyltransferase family proteinM127_0637Not AvailablePositive2102732 - 210387743733.7
alpha-n-acetylglucosaminidase (naglu) c-terminal domain proteinM127_0638Not AvailablePositive2103902 - 210605882274.1
amino acid permease family proteinM127_0639Not AvailableNegative2106151 - 210781860149.1

Displaying genes 1941 – 1950 of 5942 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.