Bacteroides fragilis str. 20793-3

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis str. 20793-3 is a Gram-negative, rod-shaped bacterium that is classified as a chemoorganotroph, deriving its energy from organic compounds. This species is an anaerobe, thriving in environments devoid of oxygen, and is typically found in host-associated habitats. Bacteroides fragilis str. 20793-3 has a single cell arrangement and is characterized by the presence of flagella, although it is non-motile. The optimal growth temperature for this strain is 37°C, placing it within the mesophilic temperature range. It possesses a unique cellular structure, consisting of two membranes and a single replicon, which is indicative of its genetic organization. Bacteroides fragilis is known for its role in the human gut microbiota, contributing to a balanced microbial community and playing a crucial role in digestion and nutrient absorption. Its ability to thrive in anaerobic conditions highlights its adaptation to the gastrointestinal environment, where oxygen levels are low. The free-living nature of this bacterium allows it to interact with various substrates and contribute to the breakdown of complex carbohydrates, thereby participating in vital ecological processes within the host. This strain, cataloged under the accession number JGEF00000000.1, emphasizes the importance of Bacteroides fragilis in maintaining gut health and its potential role in influencing host metabolism and immune responses.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
Strain20793-3

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis str. 20793-3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Bacteroides fragilis str. 20793-3 gbf207933.contig.147, whole

Gene Summary

Adenine Count

1500996 bp

Thymine Count

1507306 bp

Guanine Count

1137830 bp

Cytosine Count

1135939 bp

Genome Length

5282071 bp

Protein-coding Genes

4729 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methionine adenosyltransferaseM075_0073Not AvailablePositive75446 - 7671146346.4
putative lysine decarboxylase family proteinM075_0074Not AvailablePositive76852 - 7743921665.3
hypothetical proteinM075_0075Not AvailablePositive77562 - 7826627058.2
uroporphyrinogen-iii synthase hemd family proteinM075_0076Not AvailablePositive78292 - 7902327872.4
ribonuclease p protein componentM075_0077Not AvailablePositive79114 - 7949414670.3
putative membrane protein insertion efficiency factorM075_0078Not AvailablePositive79557 - 797125704.99
tatd related dnase family proteinM075_0079Not AvailablePositive79749 - 8035423427.8
tyrosine--trna ligaseM075_0080Not AvailablePositive80422 - 8171448220.7
peptidase s41 family proteinM075_0081Not AvailableNegative81828 - 85100122308.0
Trna-glnNot AvailableNot AvailablePositive85264 - 85334Not Available

Displaying genes 121 – 130 of 4850 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.