Bacteroides fragilis str. 1007-1-F #3

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis str. 1007-1-F #3 is a Gram-negative, anaerobic, rod-shaped bacterium that primarily inhabits host-associated environments, indicating its role in symbiotic relationships within the gut microbiota. This organism is classified as a chemoorganotroph, utilizing organic compounds as its energy source. It has a single replicon and possesses a double membrane structure, characteristic of many Gram-negative bacteria. In terms of mobility, Bacteroides fragilis str. 1007-1-F #3 does not exhibit motility, despite having flagella. Its optimal growth temperature is 37°C, placing it within the mesophilic temperature range, which is typical for many pathogenic and commensal bacteria that thrive at human body temperature. The biotic relationship of Bacteroides fragilis str. 1007-1-F #3 is noted as free-living, suggesting that while it may be found as part of a larger microbial community, it can also exist independently. This adaptability may contribute to its ecological success in various host-associated environments. Overall, the traits of Bacteroides fragilis str. 1007-1-F #3 highlight its potential significance in the gut ecosystem, where it may play a role in digestion and nutrient absorption, influencing the overall health of the host. Understanding such organisms better can provide insights into their contributions to health and disease in human microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
Strain1007-1-F #3

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis str. 1007-1-F #3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Bacteroides fragilis str. 1007-1-F #3 gbf10071F3.contig.105, whole

Gene Summary

Adenine Count

1612224 bp

Thymine Count

1622070 bp

Guanine Count

1233669 bp

Cytosine Count

1227038 bp

Genome Length

5695001 bp

Protein-coding Genes

5139 genes

Non-Coding Genes

185 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
starch-binding associating with outer membrane family proteinM146_0746Not AvailableNegative1150188 - 115178358303.3
tonb-linked outer membrane, susc/raga family proteinM146_0747Not AvailableNegative1151795 - 1154761108273.0
putative outer membrane protein, probably involved in nutrient binding proteinM146_0748Not AvailableNegative1155055 - 115655755850.7
tonb-linked outer membrane, susc/raga family proteinM146_0749Not AvailableNegative1156579 - 1159368103606.0
phage integrase family proteinM146_0750Not AvailableNegative1160034 - 116121546129.8
cna b-type domain proteinM146_0751Not AvailablePositive1161684 - 11618957193.9
tonb-linked outer membrane, susc/raga family proteinM146_0752Not AvailablePositive1162161 - 1164959103613.0
putative outer membrane protein, probably involved in nutrient binding proteinM146_0753Not AvailablePositive1164992 - 116649156225.2
tonb-linked outer membrane, susc/raga family proteinM146_0754Not AvailablePositive1167079 - 1169982105746.0
starch-binding associating with outer membrane family proteinM146_0755Not AvailablePositive1170017 - 117141151905.7

Displaying genes 1191 – 1200 of 5324 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.