Bacteroides fragilis str. Korea 419

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis strain Korea 419 is a Gram-negative, rod-shaped bacterium that thrives in anaerobic environments. This organism is characterized by its chemoorganotrophic metabolism, utilizing organic compounds as its energy source. It typically exists in a single-cell arrangement and is non-motile, although it possesses flagella. This strain is mesophilic, with an optimal growth temperature of 37°C, which aligns with the physiological conditions found within the human host. As a member of the Bacteroides genus, B. fragilis plays a significant role in the human gut microbiome, contributing to the breakdown of complex carbohydrates and maintaining gut health. Bacteroides fragilis strain Korea 419 has a unique biotic relationship as a free-living organism, highlighting its adaptability in various environments. This bacterium contains a single replicon and has a double membrane structure, consistent with its classification within the Bacteroidetes phylum. The presence of B. fragilis in the gut microbiome is crucial for various ecological functions, including the modulation of the immune system and protection against pathogenic microorganisms. Its ability to thrive in anaerobic conditions and utilize organic substrates underscores its ecological significance in maintaining gut homeostasis. The accession number for this strain is JGDW00000000.1, providing a reference for further genomic and functional studies.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
StrainKorea 419

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis str. Korea 419
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Bacteroides fragilis str. Korea 419 gbfKorea419.contig.245, whole

Gene Summary

Adenine Count

2056565 bp

Thymine Count

2093359 bp

Guanine Count

1582513 bp

Cytosine Count

1553989 bp

Genome Length

7286426 bp

Protein-coding Genes

6169 genes

Non-Coding Genes

137 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinate coa transferase family proteinM065_0020Not AvailableNegative25940 - 2743954066.7
hypothetical proteinM065_0021Not AvailableNegative27476 - 2780512511.2
pp_00022M065_0022Not AvailablePositive28136 - 29509Not Available
alpha-l-fucosidase family proteinM065_0023Not AvailablePositive29627 - 3104554782.1
putative beta-galactosidaseM065_0024Not AvailablePositive31101 - 3321580505.2
hypothetical proteinM065_0025Not AvailableNegative33348 - 335186338.62
response regulatorM065_0026Not AvailableNegative33607 - 3494150985.6
hypothetical proteinM065_0027Not AvailableNegative35750 - 358935517.72
transcriptional regulatory family proteinM065_0028Not AvailablePositive36308 - 3752548016.6
nveala family proteinM065_0029Not AvailablePositive37561 - 3786911614.0

Displaying genes 61 – 70 of 6306 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.