Bacteroides fragilis str. 3-F-2 #6

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis str. 3-F-2 #6 is a Gram-negative, rod-shaped bacterium that thrives in host-associated environments. As a chemoorganotroph, it derives energy from organic compounds, which is typical for organisms inhabiting the gut of various hosts. This species is classified as an anaerobe, meaning it thrives in environments devoid of oxygen. Bacteroides fragilis str. 3-F-2 #6 is characterized by its cell arrangement of singles and is non-motile, despite the presence of flagella. The organism has an optimal growth temperature of 37°C, which aligns with the average body temperature of many mammals, suggesting a strong adaptation to its host-associated habitat. It operates within a mesophilic temperature range, indicating that it prefers moderate temperatures for growth. The bacterium contains a single replicon and has a cellular architecture featuring two membranes, which is characteristic of Gram-negative bacteria. In terms of its ecological role, Bacteroides fragilis str. 3-F-2 #6 is free-living, contributing to the microbial ecosystem in the gut. Its presence is significant as it likely participates in the complex interactions that occur within the gut microbiome, aiding in digestion and influencing host health. Overall, the traits of Bacteroides fragilis str. 3-F-2 #6 underscore its specialized adaptation to a host-associated lifestyle and its potential role in maintaining gut homeostasis.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
Strain3-F-2 #6

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis str. 3-F-2 #6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Bacteroides fragilis str. 3-F-2 #6 gbf3F26.contig.202, whole

Gene Summary

Adenine Count

1506949 bp

Thymine Count

1506379 bp

Guanine Count

1146633 bp

Cytosine Count

1140498 bp

Genome Length

5300459 bp

Protein-coding Genes

4786 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
substrate binding domain of abc-type glycine betaine transport system family proteinM144_3216Not AvailableNegative3560851 - 356170531937.4
binding--dependent transport system inner membrane component family proteinM144_3217Not AvailableNegative3561725 - 356254929711.0
glycine betaine/l-proline transport atp binding subunitM144_3218Not AvailableNegative3562546 - 356377245765.4
hypothetical proteinM144_3219Not AvailablePositive3563810 - 35640198266.9
methylated-dna-[]-cysteine s-methyltransferase family proteinM144_3220Not AvailableNegative3564107 - 356445112834.4
response regulatorM144_3221Not AvailableNegative3564482 - 3567205102360.0
fructokinaseM144_3222Not AvailableNegative3567389 - 356827932818.5
major facilitator superfamily proteinM144_3223Not AvailableNegative3568311 - 356947742251.4
glycosyl hydrolases family 32 n-terminal domain proteinM144_3224Not AvailableNegative3569523 - 357137669610.0
putative 2,6-beta-d-fructofuranosidaseM144_3225Not AvailableNegative3571516 - 357380485544.9

Displaying genes 3221 – 3230 of 4913 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.