Bacteroides fragilis str. 3-F-2 #6

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis str. 3-F-2 #6 is a Gram-negative, rod-shaped bacterium that thrives in host-associated environments. As a chemoorganotroph, it derives energy from organic compounds, which is typical for organisms inhabiting the gut of various hosts. This species is classified as an anaerobe, meaning it thrives in environments devoid of oxygen. Bacteroides fragilis str. 3-F-2 #6 is characterized by its cell arrangement of singles and is non-motile, despite the presence of flagella. The organism has an optimal growth temperature of 37°C, which aligns with the average body temperature of many mammals, suggesting a strong adaptation to its host-associated habitat. It operates within a mesophilic temperature range, indicating that it prefers moderate temperatures for growth. The bacterium contains a single replicon and has a cellular architecture featuring two membranes, which is characteristic of Gram-negative bacteria. In terms of its ecological role, Bacteroides fragilis str. 3-F-2 #6 is free-living, contributing to the microbial ecosystem in the gut. Its presence is significant as it likely participates in the complex interactions that occur within the gut microbiome, aiding in digestion and influencing host health. Overall, the traits of Bacteroides fragilis str. 3-F-2 #6 underscore its specialized adaptation to a host-associated lifestyle and its potential role in maintaining gut homeostasis.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
Strain3-F-2 #6

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis str. 3-F-2 #6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Bacteroides fragilis str. 3-F-2 #6 gbf3F26.contig.202, whole

Gene Summary

Adenine Count

1506949 bp

Thymine Count

1506379 bp

Guanine Count

1146633 bp

Cytosine Count

1140498 bp

Genome Length

5300459 bp

Protein-coding Genes

4786 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative outer membrane proteinM144_0155Not AvailableNegative162176 - 16339645419.1
hypothetical proteinM144_0156Not AvailableNegative163455 - 1636286973.67
hypothetical proteinM144_0157Not AvailablePositive163627 - 16426824424.8
acyl-[acyl-carrier-protein]-udp-n- acetylglucosamine o-acyltransferaseM144_0158Not AvailableNegative164370 - 16514027928.6
efflux transporter, outer membrane factor (omf) lipo, nodt family proteinM144_0159Not AvailableNegative165160 - 16655150274.1
rnd transporter, hydrophobe/amphiphile efflux-1 family proteinM144_0160Not AvailableNegative166568 - 169771116519.0
efflux transporter, rnd family, mfp subunitM144_0161Not AvailableNegative169796 - 17087838936.3
hypothetical proteinM144_0162Not AvailablePositive170877 - 1710386033.45
beta galactosidase small chain family proteinM144_0163Not AvailableNegative171259 - 174363118338.0
bacterial ig-like domain proteinM144_0164Not AvailablePositive174493 - 17638872016.2

Displaying genes 211 – 220 of 4913 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.