Bacteroides fragilis str. 3-F-2 #6

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis str. 3-F-2 #6 is a Gram-negative, rod-shaped bacterium that thrives in host-associated environments. As a chemoorganotroph, it derives energy from organic compounds, which is typical for organisms inhabiting the gut of various hosts. This species is classified as an anaerobe, meaning it thrives in environments devoid of oxygen. Bacteroides fragilis str. 3-F-2 #6 is characterized by its cell arrangement of singles and is non-motile, despite the presence of flagella. The organism has an optimal growth temperature of 37°C, which aligns with the average body temperature of many mammals, suggesting a strong adaptation to its host-associated habitat. It operates within a mesophilic temperature range, indicating that it prefers moderate temperatures for growth. The bacterium contains a single replicon and has a cellular architecture featuring two membranes, which is characteristic of Gram-negative bacteria. In terms of its ecological role, Bacteroides fragilis str. 3-F-2 #6 is free-living, contributing to the microbial ecosystem in the gut. Its presence is significant as it likely participates in the complex interactions that occur within the gut microbiome, aiding in digestion and influencing host health. Overall, the traits of Bacteroides fragilis str. 3-F-2 #6 underscore its specialized adaptation to a host-associated lifestyle and its potential role in maintaining gut homeostasis.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
Strain3-F-2 #6

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis str. 3-F-2 #6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Bacteroides fragilis str. 3-F-2 #6 gbf3F26.contig.202, whole

Gene Summary

Adenine Count

1506949 bp

Thymine Count

1506379 bp

Guanine Count

1146633 bp

Cytosine Count

1140498 bp

Genome Length

5300459 bp

Protein-coding Genes

4786 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
caax protease self-immunity family proteinM144_1844Not AvailablePositive2100011 - 210088032794.1
phosphatidylinositol-specific phospholipase c, x domain proteinM144_1845Not AvailablePositive2101101 - 210213838478.3
rok family proteinM144_1846Not AvailablePositive2102303 - 210316031115.9
tonb-linked outer membrane, susc/raga family proteinM144_1847Not AvailablePositive2103309 - 2106455116457.0
starch-binding associating with outer membrane family proteinM144_1848Not AvailablePositive2106467 - 210809862675.3
alpha-1,2-mannosidase family proteinM144_1849Not AvailablePositive2108121 - 2111051109139.0
endonuclease/exonuclease/phosphatase family proteinM144_1850Not AvailablePositive2111068 - 211193132487.3
metalloenzyme superfamily proteinM144_1851Not AvailablePositive2111978 - 211312041793.8
trehalase family proteinM144_1852Not AvailablePositive2113139 - 211474362401.3
tat (twin-arginine translocation) pathway signal sequence domain proteinM144_1853Not AvailablePositive2114756 - 211512713990.2

Displaying genes 1901 – 1910 of 4913 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.