Bacteroides fragilis str. J-143-4

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis str. J-143-4 is a Gram-negative, rod-shaped bacterium classified as a chemoorganotroph, utilizing organic compounds as its energy source. This species is an anaerobe, thriving in environments devoid of oxygen, which is typical for many members of the Bacteroides genus. It is characterized by its single-cell arrangement, lacking mobility, as indicated by its absence of flagella, despite their presence in some other strains. The optimal growth temperature for Bacteroides fragilis str. J-143-4 is 37°C, placing it within the mesophilic temperature range, which is conducive to human and animal host environments. This bacterium has a biotic relationship that is categorized as free-living, suggesting its role in various ecological contexts, potentially including gut microbiota. With a single replicon and a double membrane structure, Bacteroides fragilis str. J-143-4 is representative of the complexity found within Gram-negative organisms. The accession number JGDH00000000.1 provides a reference for genomic information. Ecologically, Bacteroides fragilis species, including strain J-143-4, are significant members of the gut microbiome, contributing to nutrient metabolism and the maintenance of intestinal health. Their ability to thrive in anaerobic conditions and their role as chemoorganotrophs highlight their importance in organic matter decomposition and nutrient cycling within host-associated environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
StrainJ-143-4

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis str. J-143-4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Bacteroides fragilis str. J-143-4 gbfJ1434.contig.274, whole

Gene Summary

Adenine Count

1569177 bp

Thymine Count

1570675 bp

Guanine Count

1194027 bp

Cytosine Count

1187508 bp

Genome Length

5521387 bp

Protein-coding Genes

5056 genes

Non-Coding Genes

105 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinM067_2726Not AvailablePositive3043620 - 304439328620.2
hypothetical proteinM067_2727Not AvailablePositive3044390 - 304491418892.7
kdpg and khg aldolase family proteinM067_2728Not AvailableNegative3044993 - 304566123841.0
pfkb carbohydrate kinase family proteinM067_2729Not AvailableNegative3045708 - 304673337194.1
bacterial regulatory s, laci family proteinM067_2730Not AvailablePositive3046987 - 304805140707.4
acetyltransferase family proteinM067_2731Not AvailableNegative3048115 - 304856117548.0
hxlr-like helix-turn-helix family proteinM067_2732Not AvailableNegative3048558 - 304891413431.5
his kinase a domain proteinM067_2733Not AvailablePositive3049443 - 3052424114442.0
hd domain proteinM067_2734Not AvailableNegative3052860 - 305397243144.7
rna ligase family proteinM067_2735Not AvailableNegative3053969 - 305468227485.3

Displaying genes 2731 – 2740 of 5161 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.