Bacteroides fragilis str. 3774 T13

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis str. 3774 T13 is a Gram-negative, rod-shaped bacterium classified as a chemoorganotroph, meaning it derives energy from organic compounds. It is an anaerobe, thriving in environments devoid of oxygen, and typically exists as single cells rather than in clusters. This strain is notable for its optimal growth temperature of 37°C, placing it within the mesophilic temperature range. The bacterium possesses two membranes, characteristic of Gram-negative organisms, and has a single replicon, indicating a streamlined genetic structure. Bacteroides fragilis str. 3774 T13 does not exhibit mobility, implying a sedentary lifestyle within its host-associated habitat. While it is free-living, its ecological niche suggests a relationship with a host organism, potentially influencing the microbial community within the host's gastrointestinal tract. The presence of flagella indicates that it may have the potential for movement in certain contexts, although its lack of mobility in its current form suggests it relies on environmental factors for distribution. These traits highlight the adaptability of Bacteroides fragilis str. 3774 T13 in anaerobic environments, where it likely plays a role in digestion and nutrient cycling. In summary, Bacteroides fragilis str. 3774 T13 exemplifies the complex interactions of anaerobic bacteria within host-associated environments, contributing to the overall health and function of the microbiome while underscoring the importance of anaerobic organisms in nutrient metabolism in mesophilic conditions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
Strain3774 T13

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis str. 3774 T13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Bacteroides fragilis str. 3774 T13 gbf3774T13.contig.347, whole

Gene Summary

Adenine Count

1530357 bp

Thymine Count

1517072 bp

Guanine Count

1185653 bp

Cytosine Count

1188809 bp

Genome Length

5421891 bp

Protein-coding Genes

4936 genes

Non-Coding Genes

137 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
c-terminal processing peptidase family proteinM117_4355Not AvailablePositive5374385 - 537600760708.4
pap2 superfamily proteinM117_4356Not AvailableNegative5376091 - 537671422872.4
bacterial regulatory helix-turn-helix s, arac family proteinM117_4357Not AvailablePositive5376830 - 537770534019.9
succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family proteinM117_4358Not AvailablePositive5378392 - 537908425737.0
succinate dehydrogenase/fumarate reductase, flavoprotein subunitM117_4359Not AvailablePositive5379122 - 538106572139.9
2fe-2s iron-sulfur cluster binding domain proteinM117_4360Not AvailablePositive5381095 - 538185027275.9
pepsy-associated tm helix family proteinM117_4361Not AvailableNegative5381931 - 538306142533.9
hypothetical proteinM117_4362Not AvailableNegative5383068 - 538428844415.5
tonb-dependent receptor plug domain proteinM117_4363Not AvailableNegative5384298 - 538671590722.2
bacterial regulatory helix-turn-helix s, arac family proteinM117_4364Not AvailableNegative5386848 - 538754027129.8

Displaying genes 5031 – 5040 of 5073 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.