Bacteroides fragilis str. 3774 T13

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis str. 3774 T13 is a Gram-negative, rod-shaped bacterium classified as a chemoorganotroph, meaning it derives energy from organic compounds. It is an anaerobe, thriving in environments devoid of oxygen, and typically exists as single cells rather than in clusters. This strain is notable for its optimal growth temperature of 37°C, placing it within the mesophilic temperature range. The bacterium possesses two membranes, characteristic of Gram-negative organisms, and has a single replicon, indicating a streamlined genetic structure. Bacteroides fragilis str. 3774 T13 does not exhibit mobility, implying a sedentary lifestyle within its host-associated habitat. While it is free-living, its ecological niche suggests a relationship with a host organism, potentially influencing the microbial community within the host's gastrointestinal tract. The presence of flagella indicates that it may have the potential for movement in certain contexts, although its lack of mobility in its current form suggests it relies on environmental factors for distribution. These traits highlight the adaptability of Bacteroides fragilis str. 3774 T13 in anaerobic environments, where it likely plays a role in digestion and nutrient cycling. In summary, Bacteroides fragilis str. 3774 T13 exemplifies the complex interactions of anaerobic bacteria within host-associated environments, contributing to the overall health and function of the microbiome while underscoring the importance of anaerobic organisms in nutrient metabolism in mesophilic conditions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
Strain3774 T13

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis str. 3774 T13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Bacteroides fragilis str. 3774 T13 gbf3774T13.contig.347, whole

Gene Summary

Adenine Count

1530357 bp

Thymine Count

1517072 bp

Guanine Count

1185653 bp

Cytosine Count

1188809 bp

Genome Length

5421891 bp

Protein-coding Genes

4936 genes

Non-Coding Genes

137 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv secretory system conjugative dna transfer family proteinM117_4454Not AvailableNegative51928 - 5393776599.9
5s ribosomal rnaNot AvailableNot AvailablePositive53992 - 54099Not Available
relaxase/mobilization nuclease domain proteinM117_4455Not AvailableNegative53968 - 5521546517.8
hypothetical proteinM117_4456Not AvailableNegative55194 - 5562216808.5
hypothetical proteinM117_4457Not AvailableNegative55892 - 560234670.66
hypothetical proteinM117_4458Not AvailablePositive56044 - 562959729.6
cobq/cobb/mind/para nucleotide binding domain proteinM117_4459Not AvailablePositive56332 - 5709328644.5
hypothetical proteinM117_4460Not AvailablePositive57096 - 5753616698.7
hypothetical proteinM117_4461Not AvailablePositive57539 - 5789213630.4
putative conjugal transfer protein tradM117_4462Not AvailablePositive57909 - 5863727107.9

Displaying genes 111 – 120 of 5073 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.