Rhodomicrobium udaipurense JA643

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Hyphomicrobiaceae

Genus

Rhodomicrobium

Description

Rhodomicrobium udaipurense JA643 is a Gram-negative, rod-shaped bacterium characterized by its facultative aerobe/anaerobe oxygen requirement. It has true flagella, which contribute to its motility. This species thrives at an optimal temperature of 29°C, placing it within the mesophilic temperature range. Rhodomicrobium udaipurense JA643 possesses a single replicon and is capable of forming spores, which may play a role in its survival under varying environmental conditions. The type strain is cataloged under the accession number JFZJ00000000.1. The ability to grow in both aerobic and anaerobic conditions, coupled with spore formation, suggests that Rhodomicrobium udaipurense JA643 has adapted to diverse ecological niches. This adaptability may enable the bacterium to occupy habitats where oxygen levels fluctuate, enhancing its ecological resilience. Furthermore, its mesophilic nature indicates a preference for moderate temperature environments, which is often characteristic of organisms found in soil and aquatic ecosystems. These traits underscore the potential ecological significance of Rhodomicrobium udaipurense JA643 in nutrient cycling and microbial community dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyHyphomicrobiaceae
GenusRhodomicrobium
SpeciesRhodomicrobium udaipurense
StrainJA643

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodomicrobium udaipurense JA643
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodomicrobium udaipurense JA643 contig00256, whole genome shotgun

Gene Summary

Adenine Count

680915 bp

Thymine Count

681194 bp

Guanine Count

1132306 bp

Cytosine Count

1136694 bp

Genome Length

3631113 bp

Protein-coding Genes

3243 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crtd proteinT281_00005Not AvailableNegative1 - 127345982.1
methyltransferaseT281_00010Not AvailablePositive1401 - 256141516.1
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenaseT281_00015Not AvailablePositive2645 - 361034221.2
chitin-binding proteinT281_00020Not AvailablePositive3607 - 461735830.0
16s ribosomal rnaNot AvailableNot AvailablePositive4213 - 5693Not Available
chitin-binding proteinT281_00025Not AvailablePositive4636 - 622855782.9
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive5279 - 5751Not Available
chitin deacetylaseT281_00030Not AvailablePositive6222 - 767353084.1
hypothetical proteinT281_00035Not AvailablePositive7751 - 79457160.93
light harvesting protein subunit betaT281_00040Not AvailablePositive8066 - 82847930.49

Displaying genes 21 – 30 of 3308 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.