Paenirhodobacter enshiensis strain DW2-9

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Paenirhodobacter

Description

Paenirhodobacter enshiensis strain DW2-9 is characterized by having a single replicon, which is relevant for understanding its genomic structure and stability. The strain is cataloged under the accession number JFZB00000000.1, providing a reference for researchers interested in its genetic makeup. Paenirhodobacter species are typically associated with diverse environments, suggesting that strain DW2-9 may possess unique adaptations to its ecological niche. The presence of a single replicon could imply a streamlined genomic organization, which may contribute to efficient metabolic processes, especially in resource-limited environments. In summary, the genomic structure of Paenirhodobacter enshiensis strain DW2-9, with its single replicon, may play a significant role in its ecological interactions and survival strategies. Understanding these traits can provide insights into the adaptability and functionality of this strain in its native habitat.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenirhodobacter enshiensis strain DW2-9 contig143_scaffold81,

Gene Summary

Adenine Count

570285 bp

Thymine Count

570380 bp

Guanine Count

1149584 bp

Cytosine Count

1149342 bp

Genome Length

3439591 bp

Protein-coding Genes

2736 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
asnc family transcriptional regulatorCG50_14060Not AvailablePositive1151495 - 115191715397.8
dna helicase iiCG50_14065Not AvailablePositive1151989 - 115441589795.8
protein involved in catabolism of external dnaCG50_14070Not AvailableNegative1154475 - 115527829367.8
sodium:proton antiporterCG50_14075Not AvailablePositive1156032 - 115708436578.7
hypothetical proteinCG50_14080Not AvailableNegative1157122 - 115763418476.2
hypothetical proteinCG50_14085Not AvailablePositive1158367 - 115887319231.7
cell division protein ftsiCG50_14100Not AvailablePositive1160293 - 116208664464.3
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseCG50_14105Not AvailablePositive1162193 - 116368051859.0
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseCG50_14110Not AvailablePositive1163690 - 116519553118.5
phospho-n-acetylmuramoyl-pentapeptide- transferaseCG50_14115Not AvailablePositive1165195 - 116627738456.0

Displaying genes 1021 – 1030 of 2829 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

466 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000198tetracenomycin CC23H20O11Chemical structure of tetracenomycin CNot available
Average472.402Da
Monoisotopic472.100561464Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 466 metabolites

Health Effects

No health effects information available for this bacterium.