Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium herbicidovorans |
| Strain | NBRC 16415 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
756013 bp
Thymine Count
758507 bp
Guanine Count
1269115 bp
Cytosine Count
1248691 bp
Genome Length
4032326 bp
Protein-coding Genes
3880 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine aminotransferase | BV98_000834 | Not Available | Negative | 829922 - 831085 | 41201.0 |
| extensin family protein precursor | BV98_000835 | Not Available | Positive | 831177 - 831941 | 27411.1 |
| lysine decarboxylase precursor | BV98_000836 | Not Available | Positive | 831948 - 832862 | 34357.1 |
| had family hydrolase | BV98_000837 | Not Available | Positive | 833034 - 833705 | 25018.7 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | BV98_000838 | Not Available | Positive | 833702 - 834541 | 29487.4 |
| xenobiotic-transporting atpase | BV98_000839 | Not Available | Positive | 834650 - 836506 | 68303.7 |
| putative membrane protein | BV98_000840 | Not Available | Positive | 836517 - 836792 | 10124.8 |
| putative masp precursor | BV98_000841 | Not Available | Negative | 836833 - 837318 | 16106.8 |
| thioesterase | BV98_000842 | Not Available | Negative | 837409 - 837807 | 14910.6 |
| hypothetical protein | BV98_000843 | Not Available | Negative | 837807 - 837905 | 3441.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

