Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium herbicidovorans |
| Strain | NBRC 16415 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
756013 bp
Thymine Count
758507 bp
Guanine Count
1269115 bp
Cytosine Count
1248691 bp
Genome Length
4032326 bp
Protein-coding Genes
3880 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase assembly protein | BV98_000784 | Not Available | Negative | 784296 - 784427 | 4703.94 |
| protoheme ix farnesyltransferase | BV98_000785 | Not Available | Negative | 784424 - 785344 | 33338.4 |
| cytochrome c oxidase subunit i | BV98_000786 | Not Available | Negative | 785463 - 787130 | 60822.6 |
| cytochrome c oxidase subunit 2 | BV98_000787 | Not Available | Negative | 787148 - 788245 | 38813.6 |
| orotate phosphoribosyltransferase | BV98_000788 | Not Available | Positive | 788371 - 789009 | 22940.0 |
| pyridoxine 5'-phosphate synthase | BV98_000789 | Not Available | Positive | 789015 - 789752 | 26280.6 |
| holo-(acyl-carrier-protein) synthase | BV98_000790 | Not Available | Positive | 789749 - 790150 | 14567.7 |
| signal peptidase i | BV98_000791 | Not Available | Positive | 790182 - 791078 | 32620.0 |
| permease | BV98_000792 | Not Available | Positive | 791103 - 792182 | 38386.6 |
| peptidyl-prolyl cis-trans isomerase | BV98_000793 | Not Available | Negative | 792228 - 792791 | 19579.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

