Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium herbicidovorans |
| Strain | NBRC 16415 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
756013 bp
Thymine Count
758507 bp
Guanine Count
1269115 bp
Cytosine Count
1248691 bp
Genome Length
4032326 bp
Protein-coding Genes
3880 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy metal efflux system protein | BV98_000714 | Not Available | Negative | 707852 - 709132 | 45626.3 |
| hypothetical protein | BV98_000715 | Not Available | Negative | 709187 - 709606 | 14590.2 |
| hypothetical protein | BV98_000716 | Not Available | Negative | 709801 - 710367 | 20793.9 |
| autoinducer-binding domain-containing protein | BV98_000717 | Not Available | Positive | 710589 - 711350 | 28564.1 |
| luxr family transcriptional regulator | BV98_000718 | Not Available | Positive | 711367 - 712110 | 26868.3 |
| acyl-homoserine-lactone synthase | BV98_000719 | Not Available | Positive | 712183 - 712794 | 22822.5 |
| phytanoyl-coa dioxygenase | BV98_000720 | Not Available | Positive | 712805 - 713752 | 34420.1 |
| hypothetical protein | BV98_000721 | Not Available | Positive | 713803 - 714144 | 12161.8 |
| conjugal transfer protein | BV98_000722 | Not Available | Positive | 714141 - 714809 | 23177.7 |
| type iv secretory pathway virb2 component | BV98_000723 | Not Available | Positive | 714806 - 715144 | 11730.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

