Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium herbicidovorans |
| Strain | NBRC 16415 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
756013 bp
Thymine Count
758507 bp
Guanine Count
1269115 bp
Cytosine Count
1248691 bp
Genome Length
4032326 bp
Protein-coding Genes
3880 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fixq3 nitrogen fixation protein | BV98_000654 | Not Available | Positive | 651770 - 651940 | 6462.84 |
| cbb3-type cytochrome c oxidase subunit | BV98_000655 | Not Available | Positive | 651931 - 652809 | 32399.3 |
| hypothetical protein | BV98_000656 | Not Available | Positive | 652806 - 652994 | 6946.48 |
| cytochrome c oxidase subunit i | BV98_000657 | Not Available | Positive | 653008 - 653826 | 29525.9 |
| copper-translocating p-type atpase | BV98_000658 | Not Available | Positive | 653829 - 656090 | 79548.6 |
| cytochrome oxidase maturation protein, cbb3-type | BV98_000659 | Not Available | Positive | 656087 - 656296 | 7602.03 |
| hypothetical protein | BV98_000660 | Not Available | Positive | 656336 - 656461 | 4252.45 |
| transposase | BV98_000661 | Not Available | Positive | 656559 - 656837 | 10543.0 |
| integrase catalytic subunit | BV98_000662 | Not Available | Positive | 657196 - 657426 | 8994.62 |
| single-stranded dna-binding protein | BV98_000663 | Not Available | Positive | 658045 - 658452 | 15187.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

