Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium herbicidovorans |
| Strain | NBRC 16415 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
756013 bp
Thymine Count
758507 bp
Guanine Count
1269115 bp
Cytosine Count
1248691 bp
Genome Length
4032326 bp
Protein-coding Genes
3880 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease h | BV98_000495 | Not Available | Positive | 507854 - 508300 | 16279.3 |
| putative oxidoreductase | BV98_000496 | Not Available | Negative | 508368 - 509471 | 39246.6 |
| lysophospholipase | BV98_000497 | Not Available | Negative | 509468 - 510454 | 36741.2 |
| flp pilus assembly protein, protease cpaa precursor | BV98_000498 | Not Available | Positive | 510475 - 510948 | 17003.7 |
| flp pilus assembly protein cpab | BV98_000499 | Not Available | Positive | 510999 - 512015 | 34322.4 |
| secretion system protein precursor | BV98_000500 | Not Available | Positive | 512017 - 513543 | 52774.4 |
| flp pilus assembly protein cpad | BV98_000501 | Not Available | Positive | 513561 - 514208 | 22321.2 |
| flp pilus assembly protein atpase cpae | BV98_000502 | Not Available | Positive | 514211 - 515494 | 45634.9 |
| flp pilus assembly protein tadb | BV98_000503 | Not Available | Positive | 515543 - 516553 | 36910.3 |
| type ii secretion system protein | BV98_000504 | Not Available | Positive | 516569 - 517561 | 35896.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

