Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium herbicidovorans |
| Strain | NBRC 16415 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
756013 bp
Thymine Count
758507 bp
Guanine Count
1269115 bp
Cytosine Count
1248691 bp
Genome Length
4032326 bp
Protein-coding Genes
3880 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine protease | BV98_000384 | Not Available | Negative | 393404 - 395290 | 66068.2 |
| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | BV98_000385 | Not Available | Positive | 395444 - 396130 | 25799.7 |
| n5-carboxyaminoimidazole ribonucleotide mutase | BV98_000386 | Not Available | Positive | 396212 - 396703 | 16861.4 |
| phosphoribosylaminoimidazole carboxylase atpase subunit | BV98_000387 | Not Available | Positive | 396705 - 397775 | 37746.7 |
| dihydrofolate reductase | BV98_000388 | Not Available | Positive | 397772 - 398272 | 18149.9 |
| riboflavin biosynthesis protein ribf | BV98_000389 | Not Available | Positive | 398316 - 399257 | 33633.4 |
| isoleucine--trna ligase | BV98_000390 | Not Available | Positive | 399303 - 402254 | 110526.0 |
| lipoprotein signal peptidase | BV98_000391 | Not Available | Positive | 402375 - 402887 | 19055.8 |
| putative lipoprotein | BV98_000392 | Not Available | Positive | 402887 - 403300 | 13535.0 |
| 1-deoxy-d-xylulose-5-phosphate synthase | BV98_000393 | Not Available | Negative | 403472 - 405397 | 68392.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

