Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium herbicidovorans |
| Strain | NBRC 16415 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
756013 bp
Thymine Count
758507 bp
Guanine Count
1269115 bp
Cytosine Count
1248691 bp
Genome Length
4032326 bp
Protein-coding Genes
3880 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease 7 small subunit | BV98_000304 | Not Available | Positive | 316762 - 317088 | 11634.6 |
| farnesyl-diphosphate synthase | BV98_000305 | Not Available | Positive | 317100 - 318008 | 32095.6 |
| phosphopantetheine adenylyltransferase | BV98_000306 | Not Available | Positive | 318012 - 318524 | 18768.9 |
| peptidyl-prolyl cis-trans isomerase precursor | BV98_000307 | Not Available | Positive | 318618 - 319367 | 26457.8 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | BV98_000308 | Not Available | Positive | 319461 - 320489 | 37477.9 |
| hypothetical protein | BV98_000309 | Not Available | Negative | 320459 - 320662 | 7383.86 |
| transmembrane signal peptide protein | BV98_000310 | Not Available | Negative | 320707 - 321045 | 12384.7 |
| carbamoyl-phosphate synthase subunit l | BV98_000311 | Not Available | Positive | 321236 - 321361 | 4167.13 |
| hypothetical protein | BV98_000312 | Not Available | Negative | 321517 - 322455 | 36144.2 |
| Trna-ala | Not Available | Not Available | Positive | 322668 - 322743 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

