Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium herbicidovorans |
| Strain | NBRC 16415 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
756013 bp
Thymine Count
758507 bp
Guanine Count
1269115 bp
Cytosine Count
1248691 bp
Genome Length
4032326 bp
Protein-coding Genes
3880 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative metallopeptidase | BV98_000284 | Not Available | Positive | 297077 - 298210 | 40644.0 |
| outer membrane protein assembly factor bama precursor | BV98_000285 | Not Available | Positive | 298306 - 300951 | 97964.7 |
| outer membrane protein omph | BV98_000286 | Not Available | Positive | 300951 - 301613 | 22687.1 |
| 3-hydroxyacyl-(acyl-carrier-protein) dehydratase fabz | BV98_000287 | Not Available | Positive | 301623 - 302105 | 17165.2 |
| 50s ribosomal protein l31 | BV98_000288 | Not Available | Positive | 302311 - 302535 | 8334.82 |
| 3-dehydroquinate synthase | BV98_000289 | Not Available | Negative | 302677 - 303783 | 39283.0 |
| shikimate kinase | BV98_000290 | Not Available | Negative | 303774 - 304367 | 21478.0 |
| hypothetical protein | BV98_000291 | Not Available | Positive | 304405 - 304593 | 6930.62 |
| hypothetical protein | BV98_000292 | Not Available | Positive | 304598 - 306406 | 63396.3 |
| tyrosine recombinase xerc | BV98_000293 | Not Available | Positive | 306411 - 307328 | 32709.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

