Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium herbicidovorans |
| Strain | NBRC 16415 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
756013 bp
Thymine Count
758507 bp
Guanine Count
1269115 bp
Cytosine Count
1248691 bp
Genome Length
4032326 bp
Protein-coding Genes
3880 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylserine decarboxylase proenzyme | BV98_000274 | Not Available | Positive | 289092 - 289853 | 27552.0 |
| cdp-diacylglycerol-serine o-phosphatidyltransferase | BV98_000275 | Not Available | Positive | 289850 - 290626 | 28256.1 |
| hypothetical protein | BV98_000276 | Not Available | Negative | 290634 - 290861 | 8082.29 |
| 30s ribosomal protein s2 | BV98_000277 | Not Available | Positive | 291110 - 291868 | 27269.8 |
| elongation factor ts | BV98_000278 | Not Available | Positive | 291971 - 292903 | 31983.1 |
| uridylate kinase | BV98_000279 | Not Available | Positive | 293064 - 293789 | 25882.3 |
| ribosome-releasing factor | BV98_000280 | Not Available | Positive | 293796 - 294353 | 20334.3 |
| isoprenyl transferase | BV98_000281 | Not Available | Positive | 294397 - 295140 | 27183.3 |
| phosphatidate cytidylyltransferase | BV98_000282 | Not Available | Positive | 295144 - 295920 | 27207.2 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | BV98_000283 | Not Available | Positive | 295965 - 297080 | 39124.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

