Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium herbicidovorans |
| Strain | NBRC 16415 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
756013 bp
Thymine Count
758507 bp
Guanine Count
1269115 bp
Cytosine Count
1248691 bp
Genome Length
4032326 bp
Protein-coding Genes
3880 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoyl dehydrogenase | BV98_000264 | Not Available | Positive | 277731 - 279131 | 48529.7 |
| diguanylate cyclase | BV98_000265 | Not Available | Negative | 279190 - 280362 | 41667.8 |
| phosphoglycolate phosphatase | BV98_000266 | Not Available | Negative | 280503 - 281171 | 23499.4 |
| bifunctional protein glmu | BV98_000267 | Not Available | Positive | 281274 - 282623 | 47276.9 |
| phosphohydrolase | BV98_000268 | Not Available | Positive | 282620 - 283477 | 30729.9 |
| glutamine--fructose-6-phosphate aminotransferase (isomerizing) | BV98_000269 | Not Available | Positive | 283558 - 285381 | 65254.8 |
| lysyl-trna synthetase | BV98_000270 | Not Available | Negative | 285395 - 285592 | 7745.12 |
| hypothetical protein | BV98_000271 | Not Available | Positive | 285650 - 285976 | 11854.7 |
| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase | BV98_000272 | Not Available | Negative | 286033 - 287646 | 60158.4 |
| isocitrate dehydrogenase | BV98_000273 | Not Available | Negative | 287733 - 288953 | 45958.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

