Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium herbicidovorans |
| Strain | NBRC 16415 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
756013 bp
Thymine Count
758507 bp
Guanine Count
1269115 bp
Cytosine Count
1248691 bp
Genome Length
4032326 bp
Protein-coding Genes
3880 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asnc family transcriptional regulator | BV98_000204 | Not Available | Positive | 215792 - 216271 | 17492.1 |
| asnc family transcriptional regulator | BV98_000205 | Not Available | Positive | 216268 - 216753 | 17593.5 |
| acyl-coa dehydrogenase domain-containing protein | BV98_000206 | Not Available | Positive | 216971 - 218029 | 37597.7 |
| acyl-coa dehydrogenase | BV98_000207 | Not Available | Positive | 218026 - 219204 | 43623.9 |
| thioesterase superfamily protein | BV98_000208 | Not Available | Positive | 219208 - 219633 | 15241.0 |
| thioesterase superfamily protein | BV98_000209 | Not Available | Positive | 219630 - 220001 | 13597.8 |
| tyrosine-protein phosphatase precursor | BV98_000210 | Not Available | Negative | 220065 - 221201 | 40548.5 |
| short-chain dehydrogenase/reductase sdr | BV98_000211 | Not Available | Negative | 221170 - 221934 | 25716.0 |
| tonb-dependent receptor | BV98_000212 | Not Available | Negative | 222023 - 224182 | 79300.5 |
| transcriptional regulator, tetr family | BV98_000213 | Not Available | Positive | 224323 - 224952 | 22816.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

